Evidence map›Paper›PMID 8413258›Full record

ArticleMolecular and cellular biology1993

The intracisternal A-particle upstream element interacts with transcription factor YY1 to activate transcription: pleiotropic effects of YY1 on distinct DNA promoter elements.

K Satyamoorthy, K Park, M L Atchison, C C Howe

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 1993. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
  2. Review
  3. YY1 is a transcriptional activator of mouse LINE-1 Tf subfamily.bioRxiv : the preprint server for biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

K SatyamoorthyWistar Institute of Anatomy and Biology, Philadelphia, Pennsylvania.
K Park
M L Atchison
C C Howe
The Wistar Institute · US

Funding

GENE EXPRESSION AND MAMMALIAN DEVELOPMENTR01GM037762 · NIGMS · WISTAR INSTITUTE · PI HOWE, CHIN C · 1987 to 1994
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DNA METHYLATION AND DEVELOPMENTR01GM047421 · NIGMS · WISTAR INSTITUTE · PI HOWE, CHIN C · 1992 to 1995
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TRANSCRIPTIONAL REGULATION IN DEVELOPMENTR01HD025078 · NICHD · WISTAR INSTITUTE · PI HOWE, CHIN C · 1989 to 1991
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NICHD NIH HHS HD25078NIGMS NIH HHS GM37762NIGMS NIH HHS GM47421
6 · The paper itself

Abstract

Murine intracisternal A-particle long terminal repeats contain an intracisternal A-particle upstream enhancer (IUE) element that binds to a 65-kDa IUE binding protein (IUEB) present in both undifferentiated F9 embryonal carcinoma cells and differentiated parietal endoderm-like PYS-2 cells. This IUE element confers a CpG methylation-sensitive IUEB binding and enhancer activity. Using gel retardation, methylation interference, CpG methylation sensitivity binding, and cotransfection assays, we have now identified the 65-kDa IUEB as YY1 (also called NF-E1, delta, or UCRBP), a zinc finger protein related to the Krüppel family. YY1 binds to a number of similar but distinct DNA motifs, and cotransfection assays indicate that these motifs have different enhancer potentials in PYS-2 cells. The relative strengths of these elements are as follows: IUE > kappa E3' from the human immunoglobulin kappa light-chain 3' enhancer > upstream conserved region from the Moloney murine leukemia virus promoter. Results of DNA binding assays suggest that the differences in enhancer potentials are due to the different binding affinities of YY1 to the various motifs and the binding of two other transcription factors to the IUE sequence.

Indexed as

Gene Expression RegulationGenes, Intracisternal A-ParticlePromoter Regions, GeneticTranscription, GeneticAnimalsBase SequenceBinding SitesCarcinoma, EmbryonalConserved SequenceDNA-Binding ProteinsEnhancer Elements, GeneticErythroid-Specific DNA-Binding FactorsGenes, ImmunoglobulinHumansImmunoglobulin kappa-ChainsMethylationDNA-Binding ProteinsErythroid-Specific DNA-Binding FactorsImmunoglobulin kappa-ChainsNuclear ProteinsTranscription FactorsYY1 protein, humanYy1 protein, mouseYY1 Transcription Factor

Identifiers

PMID8413258
PMCPMC364725
OpenAlexW1870237499

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.