Evidence map›Paper›PMID 8395008›Full record

ArticleMolecular and cellular biology1993

Elements in the immunoglobulin heavy-chain enhancer directly regulate simian virus 40 ori-dependent DNA replication.

K Ariizumi, M R Ghosh, P W Tucker

Abstract read
In one paragraph

Article in Molecular and cellular biology, 1993. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 55% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

K AriizumiDepartment of Microbiology, University of Texas Southwestern Medical Center, Dallas 75235.
M R Ghosh
P W Tucker
The University of Texas Southwestern Medical Center · US

Funding

HEAVY CHAIN GENE ORGANIZATION IN TRANSFORMED B LYMPHOCYTR37AI018016 · NIAID · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI TUCKER, PHILIP W. · 1992 to 2001
$745k
HEAVY CHAIN GENE ORGANIZATION--TRANSFORMED B LYMPHOCYTESR01AI018016 · NIAID · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI TUCKER, PHILIP W. · 1985 to 1991
–
NIAID NIH HHS AI 18016
6 · The paper itself

Abstract

In a previous study, we showed that the immunoglobulin heavy-chain (IgH) enhancer (IgHe) is near or in an initiation zone of chromosomal DNA replication, which is preferentially active in B cells (K. Ariizumi, Z. Wang, and P. W. Tucker, Proc. Natl. Acad. Sci. USA 90:3695-3699, 1993). This suggests the existence of a functional relationship between IgHe-mediated transcription and DNA replication. To test this theory, we utilized simian virus 40 (SV40) DNA replication as a model of chromosomal replication. IgHe or its operationally divisible domains (5'-En, core, and 3'-En) were introduced into SV40 minichromosomes (IgHe-SV40). Results of replication assays with IgHe-SV40 replicons indicated that the 5'-En and 3'-En activated or suppressed SV40 DNA replication regardless of the presence of SV40 enhancers or promoters in these replicons. The activity did not reside in IgHe core sequences. The results suggested that the 5'- and 3'-En regulated SV40 replication through direct interaction with the origin, not through suppression at the SV40 enhancer and/or promoter. In an effort to identify elements within the 5'-En motif that contributed to this effect, we found that the E site, but not microE5 and microE2 boxes, upregulated DNA replication. Our results provide another possible regulatory function for the 5'-En and 3'-En domains besides transcriptional suppression of IgHe.

Indexed as

DNA ReplicationEnhancer Elements, GeneticGenes, ImmunoglobulinAnimalsBase CompositionBase SequenceCell LineChlorocebus aethiopsImmunoglobulin Heavy ChainsIn Vitro TechniquesMolecular Sequence DataNuclear MatrixOligodeoxyribonucleotidesRegulatory Sequences, Nucleic AcidSimian virus 40Immunoglobulin Heavy ChainsOligodeoxyribonucleotides

Identifiers

PMID8395008
PMCPMC360290
OpenAlexW1885867111

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.