Evidence map›Paper›PMID 8393577›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1993

Crystal structures of native and inhibited forms of human cathepsin D: implications for lysosomal targeting and drug design.

E T Baldwin, T N Bhat, S Gulnik, M V Hosur, R C Sowder, R E Cachau, J Collins, A M Silva, J W Erickson

Open access · greenAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1993. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
4.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 273 citations in OpenAlex.

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  10. New multienzymatic complex formed between human cathepsin D and snake venom phospholipase AThe journal of venomous animals and toxins including tropical diseases · 2022
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10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

E T BaldwinStructural Biochemistry Program, Program Resources Inc./DynCorp, National Cancer Institute-Frederick Cancer Research and Development Center, MD 21702.
T N Bhat
S Gulnik
M V Hosur
R C Sowder
R E Cachau
J Collins
A M Silva
J W Erickson
Frederick National Laboratory for Cancer Research · USNational Cancer Institute · US

Funding

OPERATIONS AND TECHNICAL SUPPORTN01CO074102 · CO · PROGRAM RESOURCES, INC. · PI COMPTON, THOMAS F · 1987 to 1998
–
NCI NIH HHS N01-CO-74102
6 · The paper itself

Abstract

Cathepsin D (EC 3.4.23.5) is a lysosomal protease suspected to play important roles in protein catabolism, antigen processing, degenerative diseases, and breast cancer progression. Determination of the crystal structures of cathepsin D and a complex with pepstatin at 2.5 A resolution provides insights into inhibitor binding and lysosomal targeting for this two-chain, N-glycosylated aspartic protease. Comparison with the structures of a complex of pepstatin bound to rhizopuspepsin and with a human renin-inhibitor complex revealed differences in subsite structures and inhibitor-enzyme interactions that are consistent with affinity differences and structure-activity relationships and suggest strategies for fine-tuning the specificity of cathepsin D inhibitors. Mutagenesis studies have identified a phosphotransferase recognition region that is required for oligosaccharide phosphorylation but is 32 A distant from the N-domain glycosylation site at Asn-70. Electron density for the crystal structure of cathepsin D indicated the presence of an N-linked oligosaccharide that extends from Asn-70 toward Lys-203, which is a key component of the phosphotransferase recognition region, and thus provides a structural explanation for how the phosphotransferase can recognize apparently distant sites on the protein surface.

Indexed as

Amino Acid SequenceAspartic Acid EndopeptidasesBiological TransportCathepsin DDrug DesignGlycosylationHumansLysosomesModels, MolecularMolecular Sequence DataPepstatinsPhosphotransferasesProtein ConformationReninX-Ray DiffractionAspartic Acid EndopeptidasesCathepsin DpepstatinPepstatinsPhosphotransferasesReninrhizopuspepsinStreptomyces pepsin inhibitor

Identifiers

PMID8393577
PMCPMC47019
OpenAlexW2164231548

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.