Evidence map›Paper›PMID 8384143›Full record

ArticleGenetics1993

A ubiquitin-conjugating enzyme, RAD6, affects the distribution of Ty1 retrotransposon integration positions.

S W Liebman, G Newnam

Abstract readComparative Study
In one paragraph

Article in Genetics, 1993. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Paf1 complex subunit Rtf1 stimulates H2B ubiquitylation by interacting with the highly conserved N-terminal helix of Rad6.Proceedings of the National Academy of Sciences of the United States of America · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

S W LiebmanDepartment of Biological Sciences, University of Illinois, Chicago 60680.
G Newnam

Funding

RECOMBINATION ASSOCIATES WITH YEAST RETROTRANSPOSONSR01GM036900 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI LIEBMAN, SUSAN W. · 1986 to 1990
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NIGMS NIH HHS GM 36900
6 · The paper itself

Abstract

A galactose-inducible Ty1 element was used to generate 59 independent Ty1 inserts that inactivate the CAN1 gene. As found in previous studies, the distribution of these elements shows a gradient of insertion frequency from highest to lowest between the 5' and 3' ends of the gene. However, 53 independent Ty1 and Ty2 insertions isolated by an identical procedure in an isogenic rad6 deletion strain do not show this bias. In this strain, the Ty elements insert randomly throughout CAN1. These results show that the ubiquitin-conjugating enzyme, RAD6, alters the integration site preferences of Ty1 retrotransposons.

Indexed as

Saccharomyces cerevisiae ProteinsAllelesBase SequenceDNA, FungalDNA Transposable ElementsFungal ProteinsGene RearrangementGenes, FungalLigasesMolecular Sequence DataMutationRestriction MappingRNA, MessengerSaccharomyces cerevisiaeUbiquitin-Conjugating EnzymesDNA, FungalDNA Transposable ElementsFungal ProteinsLigasesRAD6 protein, S cerevisiaeRNA, MessengerSaccharomyces cerevisiae ProteinsUbiquitin-Conjugating Enzymes

Identifiers

PMID8384143
PMCPMC1205338

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.