Evidence map›Paper›PMID 8382255›Full record

ArticleThe Journal of experimental medicine1993

Ordered rearrangement of variable region genes of the T cell receptor gamma locus correlates with transcription of the unrearranged genes.

J P Goldman, D M Spencer, D H Raulet

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 1993. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 104 citations in OpenAlex.

  1. Review
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  9. Functional analysis of histone methyltransferase g9a in B and T lymphocytes.Journal of immunology (Baltimore, Md. : 1950) · 2008
    Article
  10. Article
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  12. The genomic arrangement of T cell receptor variable genes is a determinant of the developmental rearrangement pattern.Proceedings of the National Academy of Sciences of the United States of America · 2004
    Article
  13. Article
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  16. High expression of a specific T-cell receptor gamma transcript in epithelial cells of the prostate.Proceedings of the National Academy of Sciences of the United States of America · 1999
    Article
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

J P GoldmanDepartment of Molecular and Cell Biology, University of California, Berkeley 94720.
D M Spencer
D H Raulet
University of California, Berkeley · US

Funding

REGULATION OF MHC-DEPENDENCE OF GAMMA DELTA T CELLSR01AI031650 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI RAULET, DAVID H · 1991 to 2010
$4.0M
NIAID NIH HHS R01 AI-31650
6 · The paper itself

Abstract

T cell receptor V gamma genes rearrange to the J gamma 1 gene segment in a highly ordered fashion during development. We demonstrate a striking correlation between the pattern of expression of unrearranged V gamma genes and the timing of their rearrangement. Thus, the increases in V gamma 2 rearrangements, and decreases in V gamma 3 and V gamma 4 rearrangements observed during development are paralleled by increasing or decreasing levels of the corresponding unrearranged V gene transcript. We also provide evidence that both the V gamma 3 and V gamma 4 genes are accessible in mature V gamma 3+ cells, but that the V gamma 4 gene may be inaccessible in the progenitors of V gamma 3 cells. The results suggest that regulated local accessibility of the chromatin surrounding V gamma genes is responsible for ordered V gamma gene rearrangement during development.

Indexed as

AnimalsBase SequenceDNAGene Rearrangement, gamma-Chain T-Cell Antigen ReceptorMiceMice, Inbred BALB CMolecular Sequence DataReceptors, Antigen, T-Cell, gamma-deltaThymus GlandTranscription, GeneticDNAReceptors, Antigen, T-Cell, gamma-delta

Identifiers

PMID8382255
PMCPMC2190937
OpenAlexW2104627746

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.