Evidence map›Paper›PMID 8371976›Full record

ArticleNucleic acids research1993

Streptolysin O-permeabilized cell system for studying trans-acting activities of exogenous nuclear proteins.

S H Liu, J C Chu, S Y Ng

Open access · greenAbstract read
In one paragraph

Article in Nucleic acids research, 1993. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 8 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

S H LiuInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan, China.
J C Chu
S Y Ng
Institute of Molecular Biology, Academia Sinica · TWFu Jen Catholic University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Efficient transfer of exogenous proteins into culture animal cells can be achieved by Streptolysin O (SLO) permeabilization of plasma membranes. We used this method to establish an in vitro transcription system for early response genes. The promoters of many early response genes contain an essential DNA motif known as the Serum Response Element (SRE). Recent data has shown that this DNA sequence is recognized by Serum Response Factor (SRF) and its associated proteins. Our initial experiments showed that HeLa nuclear extracts induced the transcription of the c-fos gene in serum-starved murine fibroblasts which were permeabilized by either physical method (glass beads) or cytolytic pore-forming protein (SLO). Plasma membrane permeabilization presumably permits passive diffusion of macromolecules into target cells and we showed that a truncated SRF expressed in bacteria was translocated into the nucleus within 30 minutes after SLO permeabilization. HeLa crude extracts were fractionated in order to identify the active nuclear factors. SRF was purified by binding to Wheat Germ Agglutinin (WGA)-agarose but the active factors remained in the WGA-unbound fractions. Our results demonstrate that this permeabilized cell in vitro transcription system is simple, efficient and can be used to test crude nuclear fractions as well as purified proteins expressed in bacteria; it will be an useful tool for the reproduction of transcriptional regulation on chromatin templates in vitro as well as the investigation of the biochemical functions of specific transcription factors or signal transduction effectors.

Indexed as

Transcription, Genetic3T3 CellsAnimalsBacterial ProteinsBase SequenceBlotting, NorthernCell Membrane PermeabilityDNAGenes, fosGenetic TechniquesHeLa CellsHumansMiceMolecular Sequence DataNuclear ProteinsPromoter Regions, GeneticBacterial ProteinsDNANuclear Proteinsstreptolysin OStreptolysinsTrans-Activators

Identifiers

PMID8371976
PMCPMC309988
OpenAlexW1994809365

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.