Evidence map›Paper›PMID 8341600›Full record

ArticleNucleic acids research1993

Interactions of USF and Ku antigen with a human DNA region containing a replication origin.

E C Tóth, L Marusic, A Ochem, A Patthy, S Pongor, M Giacca, A Falaschi

Open access · greenAbstract read
In one paragraph

Article in Nucleic acids research, 1993. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. In vivo protein-DNA interactions at human DNA replication origin.Proceedings of the National Academy of Sciences of the United States of America · 1996
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Fine mapping of a replication origin of human DNA.Proceedings of the National Academy of Sciences of the United States of America · 1994
    Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

E C TóthInternational Centre for Genetic Engineering and Biotechnology (ICGEB), AREA Science Park, Trieste, Italy.
L Marusic
A Ochem
A Patthy
S Pongor
M Giacca
A Falaschi
National Center for Genetic Engineering and Biotechnology · THInternational Centre for Genetic Engineering and Biotechnology · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

By means of a combination of ion-exchange and sequence-specific affinity chromatography techniques, we have purified to homogeneity two protein complexes binding in a human DNA region (B48) previously recognized to contain a DNA replication origin. The DNA sequence used for the protein purification (B48 binding site) contains a binding site for basic-helix-loop-helix DNA binding proteins. The first complex is composed of two polypeptides of 42- and 44-kDa; its size, heat stability, and target DNA sequence suggest that it corresponds to transcription factor USF; furthermore, the 42-kDa polypeptide is recognized by antibodies raised against 43-kDa-USF. The second complex is represented by equimolar amounts of two proteins of 72 and 87 kDa; microsequencing of the two species indicated that they correspond to the human Ku antigen. In analogy with Ku, they produce a regular pattern of footprints without an apparent sequence-specificity, and their binding can be competed by unspecific DNA provided that it contains free ends. The potential role of B48 binding site and of these cognate proteins in origin activation is discussed.

Indexed as

Antigens, NuclearDNA HelicasesDNA ReplicationAmino Acid SequenceBase SequenceBinding SitesChromatography, AffinityChromatography, Ion ExchangeDNADNA-Binding ProteinsHeLa CellsHot TemperatureHumansKu AutoantigenMolecular Sequence DataNuclear ProteinsAntigens, NuclearDNADNA-Binding ProteinsDNA HelicasesKu AutoantigenNuclear ProteinsTranscription FactorsUpstream Stimulatory FactorsUSF1 protein, humanXRCC5 protein, humanXrcc6 protein, human

Identifiers

PMID8341600
PMCPMC309764
OpenAlexW2099150686

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.