Evidence map›Paper›PMID 8336717›Full record

ArticleMolecular and cellular biology1993

Identification of cis-acting regulatory elements controlling interleukin-4 gene expression in T cells: roles for NF-Y and NF-ATc.

S J Szabo, J S Gold, T L Murphy, K M Murphy

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 1993. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
9.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 243 citations in OpenAlex.

  1. Review
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  4. Cancers · 2021
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  5. Review
  6. KCell communication and signaling : CCS · 2018
    Article
  7. Article
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  9. Transcriptional regulator Bhlhe40 works as a cofactor of T-bet in the regulation of IFN-γ production in iNKT cells.Proceedings of the National Academy of Sciences of the United States of America · 2016
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12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

S J SzaboDepartment of Pathology, Washington University School of Medicine, St. Louis, Missouri 63110.
J S Gold
T L Murphy
K M Murphy
Washington University in St. Louis · US

Funding

THE ROLE OF T CELLS IN AUTOIMMUNE MYOCARDITISP01AI031238 · NIAID · WASHINGTON UNIVERSITY · PI UNANUE, EMIL RAPHAEL · 1991 to 2007
$6.4M
NIAID NIH HHS 5 PO1 AI3123802
6 · The paper itself

Abstract

Activity of the murine interleukin-4 (IL-4) promoter was localized to several cis-acting elements present within the first 300 bp from the transcriptional initiation site. Five repeated elements, P0 to P4, that share the common consensus ATTTTCCNNT were located between -40 and -250, and each was shown to interact with the T-cell-specific factor NF(P). These distinct P sites appear functionally interchangeable and cooperatively confer cyclosporin A-sensitive and ionomycin-inducible promoter activity. NF(P) may be closely related to the cytoplasmic component of NF-AT (nuclear factor of activated T cells), a T-cell-specific factor essential for IL-2 gene transcription, as judged from indistinguishable molecular weights and protease fragmentation patterns of UV-photolabeled factors. Also, we identified an element in the IL-4 promoter with homology to the Y box common to all major histocompatibility complex class II gene promoters. Our data show that the IL-4 promoter Y box -114CTGATTGG-107 significantly enhances overall promoter activity, since point mutations within this element diminish promoter activity by 85%. The factor binding this region is indistinguishable from the cloned nuclear factor NF-Y, as judged from interactions with specific anti-NF-Y monoclonal and polyclonal antibodies. Last, we point out the presence of two sites that share sequence identity to the OAP region of the ARRE-1 site within the IL-2 promoter (K. S. Ullman, W. M. Flanagan, C. A. Edwards, and G. R. Crabtree, Science 254:558-562, 1991). These regions, -85GTGTAATA-78 and -245GTGTAATT-238, reside adjacent to the NF(P) binding sites P1 and P4 and bind a distinct nuclear factor.

Indexed as

Promoter Regions, GeneticRNA, MessengerAnimalsBase SequenceCCAAT-Enhancer-Binding ProteinsConsensus SequenceDNA-Binding ProteinsDNA Mutational AnalysisGene Expression RegulationInterleukin-4In Vitro TechniquesMiceMolecular Sequence DataNFATC Transcription FactorsNuclear ProteinsOligonucleotidesCCAAT-Enhancer-Binding ProteinsDNA-Binding ProteinsInterleukin-4NFATC Transcription FactorsNuclear ProteinsOligonucleotidesRNA, MessengerTranscription Factors

Identifiers

PMID8336717
PMCPMC360106
OpenAlexW2124473841

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.