Evidence map›Paper›PMID 8316350›Full record

ArticleOrigins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life1993

The binding and reactions of nucleotides and polynucleotides on iron oxide hydroxide polymorphs.

N G Holm, G Ertem, J P Ferris

Abstract read
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In one paragraph

Article in Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life, 1993. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.1field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Chance, necessity and the origins of life: a physical sciences perspective.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2017
    Article
  5. Review
  6. Adsorption of RNA on mineral surfaces and mineral precipitates.Beilstein journal of organic chemistry · 2017
    Article
  7. Interaction of aromatic amines with iron oxides: implications for prebiotic chemistry.Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life · 2013
    Article
  8. Oligomerization of glycine and alanine catalyzed by iron oxides: implications for prebiotic chemistry.Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life · 2012
    Article
  9. Links between hydrothermal environments, pyrophosphate, na(+), and early evolution.Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life · 2011
    Article
  10. Photooxidation of nucleic acids on metal oxides: physico-chemical and astrobiological perspectives.The journal of physical chemistry. C, Nanomaterials and interfaces · 2011
    Article
  11. Mineral surfaces, geochemical complexities, and the origins of life.Cold Spring Harbor perspectives in biology · 2010
    Review
  12. Nucleic acids bind to nanoparticulate iron (II) monosulphide in aqueous solutions.Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life · 2008
    Article
  13. Clay catalysis of oligonucleotide formation: kinetics of the reaction of the 5'-phosphorimidazolides of nucleotides with the non-basic heterocycles uracil and hypoxanthine.Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life · 1999
    Article
  14. Article
  15. Organic sulfur compounds resulting from the interaction of iron sulfide, hydrogen sulfide and carbon dioxide in an anaerobic aqueous environment.Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life · 1996
    Article
  16. Catalysis and prebiotic RNA synthesis.Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life · 1993
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

N G HolmDepartment of Geology and Geochemistry, Stockholm University, Sweden.
G Ertem
J P Ferris
Rensselaer Polytechnic Institute · USStockholm University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The iron oxide hydroxide minerals goethite and akaganéite were likely constituents of the sediments present in, for instance, geothermal regions of the primitive earth. They may have adsorbed organics and catalyzed the condensation processes which led to the origins of life. The binding to and reactions of nucleotides and oligonucleotides with these minerals was investigated. The adsorption of adenosine, 5'-AMP, 3'-AMP, 5'-UMP, and 5'-CMP to these minerals was studied. Adenosine did not bind to goethite and akaganéite. The adsorption isotherms for the binding of the nucleotides revealed that they all had close to the same affinity for the mineral. Binding to goethite was about four times stronger than to akaganéite. There was little difference in the adsorption of each nucleotide suggesting the binding was between the negative charge on the phosphate group and the positive charges on the mineral surface. The absence of binding of adenosine is consistent with this explanation. Binding decreases as the pH increases due to the titration of the positive (acidic) centers on the minerals. Two times as many moles of polynucleotides were bound to these minerals as compared to the mononucleotides. Watson-Crick hydrogen bonding of adenosine and 5'-AMP to poly(U) complexes with goethite and akaganéite was observed. There was no interaction of uridine with the poly(U)-goethite complex as expected if Watson-Crick hydrogen bonding is taking place. Neither goethite nor akaganéite catalyzed the oligomerization of the phosphorimidazolide of adenosine (ImpA). The template directed synthesis of oligomers of 5'-GMP on the poly(C) bound to goethite was observed. Higher molecular weight oligomers were observed when the poly(C) was bound to goethite than was found in the absence of the mineral.

Indexed as

AdenosineAdenosine MonophosphateAdsorptionFerric CompoundsHydrogen-Ion ConcentrationProtein BindingTemperatureAdenosineAdenosine MonophosphateFerric Compoundsferric oxideNASA Discipline ExobiologyNASA Discipline Number 52-20NASA Program ExobiologyNon-NASA Center

Identifiers

PMID8316350
OpenAlexW2004567474

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.