Evidence map›Paper›PMID 8292788›Full record

ArticlePlant molecular biology1993

Molecular cloning and evolutionary analysis of the calcium-modulated contractile protein, centrin, in green algae and land plants.

D Bhattacharya, J Steinkötter, M Melkonian

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Plant molecular biology, 1993. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 53 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Identification of a new mammalian centrin gene, more closely related to Saccharomyces cerevisiae CDC31 gene.Proceedings of the National Academy of Sciences of the United States of America · 1997
    Article
  9. Phylogenetic relationships within Hevea brasiliensis as deduced from a polymorphic mitochondrial DNA region.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 1995
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

D BhattacharyaUniversität zu Köln, Botanisches Institut, Lehrstuhl I, Germany.
J Steinkötter
M Melkonian
University of Cologne · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Centrin (= caltractin) is a ubiquitous, cytoskeletal protein which is a member of the EF-hand superfamily of calcium-binding proteins. A centrin-coding cDNA was isolated and characterized from the prasinophyte green alga Scherffelia dubia. Centrin PCR amplification primers were used to isolate partial, homologous cDNA sequences from the green algae Tetraselmis striata and Spermatozopsis similis. Annealing analyses suggested that centrin is a single-copy-coding region in T. striata and S. similis and other green algae studied. Centrin-coding regions from S. dubia, S. similis and T. striata encode four colinear EF-hand domains which putatively bind calcium. Phylogenetic analyses, including homologous sequences from Chlamydomonas reinhardtii and the land plant Atriplex nummularia, demonstrate that the domains of centrins are congruent and arose from the two-fold duplication of an ancestral EF hand with Domains 1+3 and Domains 2+4 clustering. The domains of centrins are also congruent with those of calmodulins demonstrating that, like calmodulin, centrin is an ancient protein which arose within the ancestor of all eukaryotes via gene duplication. Phylogenetic relationships inferred from centrin-coding region comparisons mirror results of small subunit ribosomal RNA sequence analyses suggesting that centrin-coding regions are useful evolutionary markers within the green algae.

Indexed as

Cell Cycle ProteinsChromosomal Proteins, Non-HistoneGenes, PlantSaccharomyces cerevisiae ProteinsAmino Acid SequenceCalcium-Binding ProteinsCalmodulinChlorophytaContractile ProteinsDNA, ComplementaryDNA PrimersFungal ProteinsMolecular Sequence DataPhylogenyPlant ProteinsSequence AlignmentCalcium-Binding ProteinsCalmodulincaltractinCDC31 protein, S cerevisiaeCell Cycle ProteinsChromosomal Proteins, Non-HistoneContractile ProteinsDNA, ComplementaryDNA PrimersFungal ProteinsPlant ProteinsSaccharomyces cerevisiae Proteins

Identifiers

PMID8292788
OpenAlexW1979883520

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.