Evidence map›Paper›PMID 8268719›Full record

ArticleGene expression1993

Analysis of the promoter element of the serum amyloid A gene and its interaction with constitutive and inducible nuclear factors from rabbit liver.

A Ray, B K Ray

Open access · greenAbstract read
In one paragraph

Article in Gene expression, 1993. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

A RayDepartment of Veterinary Microbiology, University of Missouri-Columbia 65211.
B K Ray
Missouri College · US

Funding

REGULATION OF SERUM AMYLOID A PROTEIN SYNTHESISR15DK045144 · NIDDK · UNIVERSITY OF MISSOURI-COLUMBIA · PI RAY, BIMAL K · 1992 to 1992
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NIDDK NIH HHS DK 45144-01
6 · The paper itself

Abstract

In an effort to identify regulatory elements of the serum amyloid A (SAA) gene that play a major role in its expression under acute-phase conditions, we studied the expression of a set of chimeric SAA-chloramphenicol acetyltransferase (CAT) plasmids containing a progressively deleted upstream 5' sequence of the SAA gene. Two regulatory regions (-314 to -135 and -135 to -31) capable of driving cytokine-induced transcription have been identified. Gel retardation assays revealed that the regulatory region located between positions -314 and -135 is a major site of interaction for highly inducible and constitutive nuclear proteins in acute-phase rabbit liver. DNase I footprint and competition analyses showed that this region contains two adjacent nuclear protein binding sites (between -191 and -140) with varying affinity for protein binding. Both of these binding sites are capable of driving cytokine-induced transcription of a reporter gene containing a minimal promoter. Detailed analyses of the inducible nuclear proteins that bind to this promoter element showed that they are homologues of the CCAAT/enhancer binding protein (C/EBP) family. Accumulation of the inducible nuclear factors under acute conditions, when maximal transcription activity has been reported, suggests a critical role for these proteins in the expression of the SAA gene.

Indexed as

Promoter Regions, GeneticAnimalsBase SequenceBinding SitesCCAAT-Enhancer-Binding ProteinsCloning, MolecularDeoxyribonuclease IDNADNA-Binding ProteinsGene Expression RegulationHot TemperatureLiverMolecular Sequence DataNuclear ProteinsRabbitsSerum Amyloid A ProteinCCAAT-Enhancer-Binding ProteinsDeoxyribonuclease IDNADNA-Binding ProteinsNuclear ProteinsSerum Amyloid A ProteinTranscription Factors

Identifiers

PMID8268719
PMCPMC6081631
OpenAlexW2443456588

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.