ArticleNucleic acids research1993
Analysis of the Escherichia coli genome. IV. DNA sequence of the region from 89.2 to 92.8 minutes.
Article in Nucleic acids research, 1993. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.
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Who cites it
55 citing papers in PubMed.
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- Mycobacterium smegmatis D-Alanine Racemase Mutants Are Not Dependent on D-Alanine for Growth.Antimicrobial agents and chemotherapy · 2002Article
- Regulation of acetyl coenzyme A synthetase in Escherichia coli.Journal of bacteriology · 2000Article
- Recombinational repair of DNA damage in Escherichia coli and bacteriophage lambda.Microbiology and molecular biology reviews : MMBR · 1999Review
- The gene locus yijP contributes to Escherichia coli K1 invasion of brain microvascular endothelial cells.Infection and immunity · 1999Article
- RPE, a plant gene involved in early developmental steps of nematode feeding cells.The EMBO journal · 1998Article
- D-Ribulose-5-phosphate 3-epimerase: cloning and heterologous expression of the spinach gene, and purification and characterization of the recombinant enzyme.Plant physiology · 1998Article
- Linkage map of Escherichia coli K-12, edition 10: the traditional map.Microbiology and molecular biology reviews : MMBR · 1998Review
- Efficient sequence analysis of the six gene products (7-74 kDa) from the Escherichia coli thiamin biosynthetic operon by tandem high-resolution mass spectrometry.Protein science : a publication of the Protein Society · 1998Article
- Structure and distribution of pentapeptide repeats in bacteria.Protein science : a publication of the Protein Society · 1998Article
- Evolution of enterohemorrhagic Escherichia coli hemolysin plasmids and the locus for enterocyte effacement in shiga toxin-producing E. coli.Infection and immunity · 1998Article
- Identification and analysis of genes involved in anaerobic toluene metabolism by strain T1: putative role of a glycine free radical.Applied and environmental microbiology · 1998Article
- Periplasmic nitrate-reducing system of the phototrophic bacterium Rhodobacter sphaeroides DSM 158: transcriptional and mutational analysis of the napKEFDABC gene cluster.The Biochemical journal · 1998Article
- Acetylation at Lys-92 enhances signaling by the chemotaxis response regulator protein CheY.Proceedings of the National Academy of Sciences of the United States of America · 1998Article
- A stationary phase protein in Escherichia coli with binding activity to the major sigma subunit of RNA polymerase.Proceedings of the National Academy of Sciences of the United States of America · 1998Article
- Characterization of the bvgR locus of Bordetella pertussis.Journal of bacteriology · 1998Article
- The D-allose operon of Escherichia coli K-12.Journal of bacteriology · 1997Article
- Arac/XylS family of transcriptional regulators.Microbiology and molecular biology reviews : MMBR · 1997Review
- Regulation of chromosomally mediated multiple antibiotic resistance: the mar regulon.Antimicrobial agents and chemotherapy · 1997Review
Corrections and comments
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Authors and funding
5 authors.
Funding
Abstract
We present the sequence of 176 kilobases of the Escherichia coli K-12 genome, from katG at 89.2 to an open reading frame (ORF) of unknown function at 92.8 minutes on the genetic map. This brings the total of contiguous sequence from the E. coli genome project to 500 kb (81.5 to 92.8 minutes). This segment contains 134 putative coding genes (ORFs) of which 66 genes were previously identified. Eight new genes--acs, pepE, and nrfB-G--were identified as well as the previously mapped gldA and alr genes. Still, 58 ORFs remain unidentified despite literature and similarity searches. The arrangement of proposed genes relative to possible promoters and terminators suggests 55 potential transcription units. Other features include 13 REP elements, one IRU (ERIC) repeat, 59 computer-predicted bends, 42 Chi sites and one new grey hole. Sixteen signal peptides were found, including those of lamB, btuB, and malE. Two ribosomal RNA loci, rrnB and rrnE, are located in this segment, so we have now sequenced four of the seven E. coli rRNA loci. Comparison of the rRNA loci reveals some differences in the ribosomal structural RNAs which are generally compatible with the proposed secondary structures.
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