Evidence map›Paper›PMID 8248212›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1993

TAP1 alleles in insulin-dependent diabetes mellitus: a newly defined centromeric boundary of disease susceptibility.

D G Jackson, J D Capra

Open access · greenAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1993. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
6.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 66 citations in OpenAlex.

  1. Pooled it
  2. BRD2 and TAP-1 genes and juvenile myoclonic epilepsy.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2010
    Article
  3. Article
  4. Superantigens in insulin-dependent diabetes mellitus.Springer seminars in immunopathology · 1996
    Review
  5. Review
  6. Article
  7. Reproductive failure and the major histocompatibility complex.American journal of human genetics · 1995
    Article
  8. Transporters from H-2b, H-2d, H-2s, H-2k, and H-2g7 (NOD/Lt) haplotype translocate similar sets of peptides.Proceedings of the National Academy of Sciences of the United States of America · 1994
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

D G JacksonCenter for Diabetes Research, University of Texas Southwestern Medical Center at Dallas 75235-9048.
J D Capra
The University of Texas Southwestern Medical Center · US

Funding

MAJOR HISTOCOMPATIBILITY COMPLEX IN HUMAN DISEASEP01AI023271 · NIAID · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI CAPRA, J DONALD · 1986 to 1993
–
ROLE OF INFLAMMATORY CYTOKINES IN ISLET CELL DAMAGEP01DK042582 · NIDDK · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI LECHAGO, JUAN · 1990 to 1995
–
NIAID NIH HHS AI23271NIDDK NIH HHS DK42582
6 · The paper itself

Abstract

It has been previously demonstrated that individuals with certain DR alleles have an increased relative risk of developing insulin-dependent diabetes mellitus (IDDM). The disease association is even stronger with certain DQ alleles but there is little association with DP providing a boundary of disease association to the 430 kb between DQ and DP. The recently described TAP (transporter associated with antigen processing) genes have been mapped approximately midway between DP and DQ. Therefore, it was of interest to determine if any TAP alleles were associated with IDDM. In addition to the alleles of TAP1 that have been described, others were identified during this study. Diabetics and normal controls were screened for TAP1 using single-stranded conformational polymorphism and relative risk was determined. In the same population group we have studied extensively in the past, we found a higher association of a TAP1 allele with IDDM than with any single HLA-DP allele but the risk was lower than with HLA-DQB1*0302. These data provide new limits for IDDM susceptibility to the 190-kb interval between TAP1 and HLA-DQB1.

Indexed as

ATP-Binding Cassette TransportersAllelesATP Binding Cassette Transporter, Subfamily B, Member 2Base SequenceCarrier ProteinsCentromereChromosome MappingDiabetes Mellitus, Type 1DNA PrimersGene FrequencyGenes, MHC Class IIGenetic LinkageHistocompatibility Antigens Class IIHumansMolecular Sequence DataSequence AlignmentATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily B, Member 2Carrier ProteinsDNA PrimersHistocompatibility Antigens Class IITAP1 protein, human

Identifiers

PMID8248212
PMCPMC47925
OpenAlexW2021303632

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.