Evidence map›Paper›PMID 8196665›Full record

ArticleMolecular and cellular biology1994

GATA elements are necessary for the activity and tissue specificity of the T-cell receptor beta-chain transcriptional enhancer.

A J Henderson, S McDougall, J Leiden, K L Calame

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 1994. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

A J HendersonDepartment of Microbiology, College of Physicians and Surgeons, Columbia University, New York, New York 10032.
S McDougall
J Leiden
K L Calame
Columbia University · USUniversity of Chicago · USWest Los Angeles College · US

Funding

TRANSCRIPTION OF IMMUNOGLUBULIN HEAVY CHAIN GENESR01GM029361 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI CALAME, KATHRYN L. · 1985 to 2001
$831k
T-CELL RECEPTOR BETA CHAIN GENE REGULATIONR01GM044300 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI CALAME, KATHRYN L. · 1991 to 1994
–
NIGMS NIH HHS GM29361NIGMS NIH HHS GM44300
6 · The paper itself

Abstract

Three high-affinity binding sites for the GATA family of transcriptional regulators have been identified within the T-cell receptor beta-chain (TCR beta) transcriptional enhancer, and their functional significance has been determined in an effort to understand the T-cell specificity of the enhancer more fully. One site, TE4, is important for activity of the enhancer in T cells. Neither site TE1 nor site TE2 can functionally replace a mutated TE4 site in T cells; however, the same protein, probably GATA-3, binds all three sites, as judged by electrophoretic mobility shift, oligonucleotide competition, and proteolytic clipping assays. These data suggest that additional proteins are critical for the ability of GATA-3 to activate the TCR beta enhancer. In fibroblasts, the GATA sequence at site TE1 appears to bind a negative regulator. Since this is not true in B cells, B cells and fibroblasts appear to have different mechanisms for negative regulation of the TCR beta enhancer.

Indexed as

Enhancer Elements, GeneticGene ExpressionAnimalsBase SequenceBinding SitesCell LineCell NucleusChloramphenicol O-AcetyltransferaseDNA-Binding ProteinsDNA PrimersGATA3 Transcription FactorMiceMolecular Sequence DataMutagenesis, Site-DirectedOligodeoxyribonucleotidesPolymerase Chain ReactionChloramphenicol O-AcetyltransferaseDNA-Binding ProteinsDNA PrimersGata3 protein, mouseGATA3 Transcription FactorOligodeoxyribonucleotidesReceptors, Antigen, T-Cell, alpha-betaTrans-ActivatorsTranscription Factors

Identifiers

PMID8196665
PMCPMC358795
OpenAlexW1767940288

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.