Evidence map›Paper›PMID 8196644›Full record

ArticleMolecular and cellular biology1994

Mapping and mutagenesis of the amino-terminal transcriptional repression domain of the Drosophila Krüppel protein.

J D Licht, W Hanna-Rose, J C Reddy, M A English, M Ro, M Grossel, R Shaknovich, U Hansen

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In one paragraph

Article in Molecular and cellular biology, 1994. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
  2. Article
  3. The gap gene network.Cellular and molecular life sciences : CMLS · 2011
    Review
  4. Article
  5. EVOPRINTER, a multigenomic comparative tool for rapid identification of functionally important DNA.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
  6. CtBP-independent repression in the Drosophila embryo.Molecular and cellular biology · 2003
    Article
  7. Article
  8. Article
  9. Article
  10. Transcription repression by Xenopus ET and its human ortholog TBX3, a gene involved in ulnar-mammary syndrome.Proceedings of the National Academy of Sciences of the United States of America · 1999
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Synpolydactyly phenotypes correlate with size of expansions in HOXD13 polyalanine tract.Proceedings of the National Academy of Sciences of the United States of America · 1997
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

J D LichtLaboratory of Eukaryotic Transcription, Dana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts 02115.
W Hanna-Rose
J C Reddy
M A English
M Ro
M Grossel
R Shaknovich
U Hansen
Dana-Farber Cancer Institute · US

Funding

Tumor Cell Biology Training ProgramT32CA009361 · NCI · DANA-FARBER CANCER INSTITUTE · PI GRAY, NATHANAEL SCHIANDER · 1985 to 2015
$8.9M
MOLECULAR CLONING OF A EUKARYOTIC TRANSCRIPTION FACTORK11CA001272 · NCI · MOUNT SINAI SCHOOL OF MEDICINE OF CUNY · PI LICHT, JONATHAN D. · 1987 to 1991
–
BIOMEDICAL RESEARCH SUPPORTS07RR005526 · NCRR · DANA-FARBER CANCER INSTITUTE · PI JANICKI, BERNARD W · 1985 to 1992
–
NCI NIH HHS K11-CA01272NCI NIH HHS T32-CA09361NCRR NIH HHS S07-RR05526
6 · The paper itself

Abstract

We previously demonstrated that the Drosophila Krüppel protein is a transcriptional repressor with separable DNA-binding and transcriptional repression activities. In this study, the minimal amino (N)-terminal repression region of the Krüppel protein was defined by transferring regions of the Krüppel protein to a heterologous DNA-binding protein, the lacI protein. Fusion of a predicted alpha-helical region from amino acids 62 to 92 in the N terminus of the Krüppel protein was sufficient to transfer repression activity. This putative alpha-helix has several hydrophobic surfaces, as well as a glutamine-rich surface. Mutants containing multiple amino acid substitutions of the glutamine residues demonstrated that this putative alpha-helical region is essential for repression activity of a Krüppel protein containing the entire N-terminal and DNA-binding regions. Furthermore, one point mutant with only a single glutamine on this surface altered to lysine abolished the ability of the Krüppel protein to repress, indicating the importance of the amino acid at residue 86 for repression. The N terminus also contained an adjacent activation region localized between amino acids 86 and 117. Finally, in accordance with predictions from primary amino acid sequence similarity, a repression region from the Drosophila even-skipped protein, which was six times more potent than that of the Krüppel protein in the mammalian cells, was characterized. This segment included a hydrophobic stretch of 11 consecutive alanine residues and a proline-rich region.

Indexed as

Point MutationRepressor ProteinsAmino Acid SequenceAnimalsBase SequenceDNA-Binding ProteinsDNA PrimersDrosophilaDrosophila ProteinsKruppel-Like Transcription FactorsMolecular Sequence DataMutagenesis, InsertionalMutagenesis, Site-DirectedPlasmidsPolymerase Chain ReactionProtein FoldingDNA-Binding ProteinsDNA PrimersDrosophila ProteinsKr protein, DrosophilaKruppel-Like Transcription FactorsRepressor ProteinsTranscription Factors

Identifiers

PMID8196644
PMCPMC358771
OpenAlexW2137679251

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.