Evidence map›Paper›PMID 8196634›Full record

ArticleMolecular and cellular biology1994

A human Alu RNA-binding protein whose expression is associated with accumulation of small cytoplasmic Alu RNA.

D Y Chang, B Nelson, T Bilyeu, K Hsu, G J Darlington, R J Maraia

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 1994. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 40 citations in OpenAlex.

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  6. Potential for retroposition by old Alu subfamilies.Journal of molecular evolution · 2003
    Article
  7. Cis-acting influences on Alu RNA levels.Nucleic acids research · 2000
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

D Y ChangLaboratory of Molecular Growth Regulation, National Institute of Child Health and Human Development, Bethesda, Maryland 20892.
B Nelson
T Bilyeu
K Hsu
G J Darlington
R J Maraia

Funding

LIVER-SPECIFIC GENE REGULATION BY C/EBP-LIKE TRANSFACTORR01DK045285 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI DARLINGTON, GRETCHEN J. · 1993 to 2000
$261k
SURGICAL APPROACH TO HEPATOCELLULAR TRANSPLANTATIONP01DK044080 · NIDDK · BAYLOR COLLEGE OF MEDICINE · 1991 to 1995
–
NIDDK NIH HHS DK44080NIDDK NIH HHS DK45285
6 · The paper itself

Abstract

Human Alu sequences are short interspersed DNA elements which have been greatly amplified by retrotransposition. Although initially derived from the 7SL RNA component of signal recognition particle (SRP), the Alu sequence has evolved into a dominant transposon while retaining a specific secondary structure found in 7SL RNA. We previously characterized a set of Alu sequences which are expressed as small cytoplasmic RNAs and isolated a protein that binds to these transcripts. Here we report that biochemical purification of this protein revealed it as the human homolog of the SRP 14 polypeptide which binds the Alu-homologous region of 7SL RNA. The human cDNA predicts an alanine-rich C-terminal tail translated from a trinucleotide repeat not found in the rodent homolog, which accounts for why the human protein-RNA complex migrates more slowly than its rodent counterpart in RNA mobility shift assays. The human Alu RNA-binding protein (RBP) is expressed after transfection of this cDNA into mouse cells. Expression of human RBP in rodent x human somatic cell hybrids is associated with substantial increase in endogenous small cytoplasmic Alu and scB1 transcripts but not other small RNAs. These studies provide evidence that this RBP associates with Alu transcripts in vivo and affects their metabolism and suggests a role for Alu transcripts in translation in an SRP-like manner. Analysis of hybrid lines indicated that the Alu RBP gene maps to human chromosome 15q22, which was confirmed by Southern blotting. The possibility that the primate-specific structure of this protein may have contributed to Alu evolution is considered.

Indexed as

Amino Acid SequenceAnimalsBase SequenceBlotting, NorthernBlotting, SouthernChromatography, AffinityChromatography, GelChromatography, Ion ExchangeChromosome MappingChromosomes, HumanCytoplasmDNADNA PrimersDNA Transposable ElementsHeLa CellsHumansDNADNA PrimersDNA Transposable ElementsOligonucleotides, AntisenseRNA-Binding Proteins

Identifiers

PMID8196634
PMCPMC358761
OpenAlexW1938929720

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.