Evidence map›Paper›PMID 8183951›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1994

Similarity between a ubiquitous promoter element in an ancient eukaryote and mammalian initiator elements.

D V Quon, M G Delgadillo, A Khachi, S T Smale, P J Johnson

Open access · greenAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1994. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 75 citations in OpenAlex.

  1. Article
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  7. Regulation of gene expression in protozoa parasites.Journal of biomedicine & biotechnology · 2010
    Review
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  17. Transient and selectable transformation of the parasitic protist Trichomonas vaginalis.Proceedings of the National Academy of Sciences of the United States of America · 1997
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

D V QuonDepartment of Microbiology and Immunology, University of California, School of Medicine, Los Angeles 90024-1747.
M G Delgadillo
A Khachi
S T Smale
P J Johnson
University of California, Los Angeles · US

Funding

UCLA-Caltech Medical Scientist Training ProgramT32GM008042 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI AJIJOLA, OLUJIMI A, DAWSON, DAVID WAYNE · 1985 to 2023
$29.9M
Biogenesis of Hydrogenosomes of a Trichomonad ParasiteR37AI027857 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI JOHNSON, PATRICIA JEAN · 2004 to 2013
$4.5M
Gene Expression in Trichomonas vaginalisR01AI030537 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI JOHNSON, PATRICIA JEAN · 1991 to 2008
$2.7M
BIOGENESIS OF HYDROGENOSOMES OF A TRICHOMONAD PARASITER01AI027857 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI JOHNSON, PATRICIA JEAN · 1994 to 2003
$1.3M
BIOGENESIS OF HYDROGENOSOMES OF A TRICHOMONAD PARASITER29AI027857 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI JOHNSON, PATRICIA JEAN · 1989 to 1993
–
NIAID NIH HHS AI27857NIAID NIH HHS AI 30537NIGMS NIH HHS GM-08042
6 · The paper itself

Abstract

To identify regulatory elements that play a role in transcription initiation in ancient eukaryotes, we have analyzed the upstream regions of protein-coding genes from Trichomonas vaginalis, one of the most ancient eukaryotes studied to date. Characterization of seven protein-coding genes from this protist invariably revealed the presence of a highly conserved DNA sequence motif immediately upstream of the coding region. This 13-nt motif was shown to surround and contain precise sites for transcription initiation. No typical TATA boxes, positioned at 25-30 nt upstream of the transcription start sites of these genes, were found. The start-site regions from all seven T. vaginalis genes impart strong specific initiation of transcription in a mammalian in vitro transcription assay. This consensus promoter element in an ancient eukaryote is similar, both structurally and functionally, to initiator elements found in promoters of higher eukaryotes.

Indexed as

Biological EvolutionPromoter Regions, GeneticRegulatory Sequences, Nucleic AcidAnimalsBase SequenceCell NucleusCloning, MolecularConserved SequenceDNA PrimersDNA, ProtozoanHeLa CellsHumansMolecular Sequence DataPolymerase Chain ReactionProtozoan ProteinsSequence Homology, Nucleic AcidDNA PrimersDNA, ProtozoanProtozoan Proteins

Identifiers

PMID8183951
PMCPMC43829
OpenAlexW1968422318

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.