Evidence map›Paper›PMID 8168479›Full record

ArticleThe EMBO journal1994

The mouse lethal nonagouti (a(x)) mutation deletes the S-adenosylhomocysteine hydrolase (Ahcy) gene.

M W Miller, D M Duhl, B M Winkes, F Arredondo-Vega, P J Saxon, G L Wolff, C J Epstein, M S Hershfield, G S Barsh

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 1994. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 112 citations in OpenAlex.

  1. Trial
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Functional and Pathological Roles of AHCY.Frontiers in cell and developmental biology · 2021
    Review
  13. O-GlcNAcylation regulates the methionine cycle to promote pluripotency of stem cells.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  14. Article
  15. Article
  16. Homocysteine regulates fatty acid and lipid metabolism in yeast.The Journal of biological chemistry · 2018
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

M W MillerDepartment of Pediatrics, Stanford University School of Medicine, CA 94305-5428.
D M Duhl
B M Winkes
F Arredondo-Vega
P J Saxon
G L Wolff
C J Epstein
M S Hershfield
G S Barsh
Stanford University · US

Funding

LYMPHOBLAST MODEL FOR DISEASES OF PURINE METABOLISMR01DK020902 · NIDDK · DUKE UNIVERSITY · PI HERSHFIELD, MICHAEL S · 1986 to 2006
$1.8M
PHYSICAL &GENETIC ANALYSIS OF THE MOUSE AGOUTI LOCUSR29HG000377 · NHGRI · STANFORD UNIVERSITY · PI BARSH, GREGORY S. · 1990 to 1993
–
BIOCHEMISTRY OF EARLY MAMMALIAN DEVELOPMENTR37HD003132 · NICHD · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI EPSTEIN, CHARLES J · 1986 to 1993
–
NHGRI NIH HHS HG-00377NICHD NIH HHS HD-03132NIDDK NIH HHS DK-20902
6 · The paper itself

Abstract

The lethal nonagouti (a(x)) mutation is a hypomorphic allele of the agouti coat color locus which, when homozygous, also leads to embryonic death around the time of implantation. To understand the molecular basis of these phenotypes, we identified and cloned a deletion breakpoint junction present in the ax chromosome. Long range restriction mapping demonstrated a simple deletion of approximately 100 kb, which does not affect agouti coding sequences, but begins only 4 kb 3' of the last exon, and thus may affect coat color by removing an agouti 3' enhancer. The Ahcy gene, which codes for the enzyme S-adenosylhomocysteine hydrolase (SAHase), is contained within a 20 kb region within the a(x) deletion. SAHase RNA and protein were detectable in early blastocysts and in embryonic stem cells, respectively, and analysis of embryos derived from an a(x)/a x a(x)/a embryo intercross indicated that a(x)/a embryos die between the late blastocyst and early implantation stages. Treatment of cultured embryos with an SAHase inhibitor, 3-deazaaristeromycin, or with metabolites that can result in elevated levels of cellular SAH, resulted in an inhibition of inner cell mass development, suggesting that loss of SAHase activity in a(x)/a(x) embryos is sufficient to explain their death around the time of implantation.

Indexed as

Genes, LethalIntercellular Signaling Peptides and ProteinsMutationSequence DeletionAdenosine DeaminaseAdenosylhomocysteinaseAgouti Signaling ProteinAnimalsBase SequenceCloning, MolecularEmbryonic and Fetal DevelopmentHomozygoteHydrolasesMaleMiceMice, Inbred C57BLAdenosine DeaminaseAdenosylhomocysteinaseAgouti Signaling ProteinHydrolasesIntercellular Signaling Peptides and ProteinsProteinsS-AdenosylhomocysteineS-Adenosylmethionine

Identifiers

PMID8168479
PMCPMC395020
OpenAlexW92889

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.