Evidence map›Paper›PMID 8144470›Full record

ArticleJournal of bacteriology1994

Evidence that asgB encodes a DNA-binding protein essential for growth and development of Myxococcus xanthus.

L Plamann, J M Davis, B Cantwell, J Mayor

Abstract readComparative Study
In one paragraph

Article in Journal of bacteriology, 1994. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Article
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  11. Chemotaxis as an emergent property of a swarm.Journal of bacteriology · 2008
    Article
  12. Article
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  14. Article
  15. Article
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  18. Article
  19. Mob psychology.Journal of bacteriology · 2002
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

L PlamannDepartment of Biology, Texas A&M University, College Station 77843-3258.
J M Davis
B Cantwell
J Mayor

Funding

CELL SIGNALING DURING EARLY MYXOCOCCUS DEVELOPMENTR01GM047265 · NIGMS · UNIVERSITY OF MISSOURI KANSAS CITY · PI PLAMANN, LYNDA S · 1997 to 2001
$265k
CELL SIGNALING DURING EARLY MYXOCOCCUS DEVELOPMENTR29GM047265 · NIGMS · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI PLAMANN, LYNDA S · 1992 to 1996
–
NIGMS NIH HHS GM47265
6 · The paper itself

Abstract

The asg mutants of Myxococcus xanthus are defective in production of extracellular A-signal, which serves as a cell density signal for fruiting-body development. The DNA sequence of asgB, one of the three asg genes, was determined. The deduced amino acid sequence of AsgB contains a DNA-binding helix-turn-helix motif near the C terminus. This putative helix-turn-helix is highly similar to the helix-turn-helix in region 4.2 of major sigma factors, which is the region that recognizes and interacts with -35 sequences of promoters. We propose that AsgB is a transcription factor that binds to DNA sequences similar to the -35 hexamer, TTGACA. Analyses of asgB RNA levels and expression of an asgB-lacZ translational fusion indicate that expression of asgB remains fairly constant during the transition from growth into early development. The mutation within the asgB480 allele was identified as an A-to-G transition that results in a threonine-to-alanine substitution in the predicted protein product. Attempts to replace the wild-type copy of asgB with a null allele failed, indicating that asgB may be essential for growth.

Indexed as

Bacterial ProteinsAmino Acid SequenceBase SequenceCell CommunicationDNA-Binding ProteinsDNA Mutational AnalysisGene Expression Regulation, BacterialInosine MonophosphateMolecular Sequence DataMutationMyxococcus xanthusOpen Reading FramesRNA, MessengerSequence Analysis, DNASequence Homology, Amino AcidTranscription FactorsAsgB protein, Myxococcus xanthusBacterial ProteinsDNA-Binding ProteinsInosine MonophosphateRNA, MessengerTranscription Factors

Identifiers

PMID8144470
PMCPMC205307

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.