Evidence map›Paper›PMID 8093645›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1993

Universal mapping probes and the origin of human chromosome 3.

O Hino, J R Testa, K H Buetow, T Taguchi, J Y Zhou, M Bremer, A Bruzel, R Yeung, G Levan, K K Levan

Open access · greenAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1993. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
10.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
  2. Exploiting dinucleotide microsatellites conserved among mammalian species.Mammalian genome : official journal of the International Mammalian Genome Society · 1996
    Article
  3. Mapping of 22 Notl linking clones on human chromosome 3 by polymerase chain reaction and somatic cell hybrid panels.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 1996
    Article
  4. Article
  5. DNA diagnosis of human genetic individuality.Journal of molecular medicine (Berlin, Germany) · 1995
    Review
  6. Isolation of microdissection clones from rat chromosome 10.Mammalian genome : official journal of the International Mammalian Genome Society · 1995
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

O HinoInstitute for Cancer Research, Fox Chase Cancer Center, Philadelphia, PA 19111.
J R Testa
K H Buetow
T Taguchi
J Y Zhou
M Bremer
A Bruzel
R Yeung
G Levan
K K Levan
Fox Chase Cancer Center · US

Funding

MOLECULAR GENETIC ALTERATIONS IN MALIGNANT MESOTHELIOMAR01CA045745 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI TESTA, JOSEPH R. · 1987 to 2006
$1.8M
SEQUENCE TAGGED SITE MARKERS FOR THE HUMAN GENOMEP50HG000206 · NHGRI · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI MYERS, RICHARD M · 1990 to 1999
–
HEREDITARY AND INDUCED CANCER IN MODELR01CA043211 · NCI · INSTITUTE FOR CANCER RESEARCH · PI KNUDSON, ALFRED G. · 1986 to 1992
–
NCI NIH HHS CA43211NCI NIH HHS CA45745NHGRI NIH HHS HG00206
6 · The paper itself

Abstract

Universal mapping probes (UMPs) are defined as short segments of human DNA that are useful for physical and genetic mapping in a wide variety of mammals. The most useful UMPs contain a conserved DNA sequence immediately adjoined to a highly polymorphic CA repeat. The conserved region determines physical gene location, whereas the CA repeat facilitates genetic mapping. Both the CA repeat and its neighboring sequence are highly conserved in evolution. This permits molecular, cytogenetic, and genetic mapping of UMPs throughout mammalia. UMPs are significant because they make genetic information cumulative among well-studied species and because they transfer such information from "map rich" organisms to those that are "map poor." As a demonstration of the utility of UMPs, comparative maps between human chromosome 3 (HSA3) and the rat genome have been constructed. HSA3 is defined by at least 12 syntenic clusters located on seven different rat chromosomes. These data, together with previous comparative mapping information between human, mouse, and bovine genomes, allow us to propose a distinct evolutionary pathway that connects HSA3 with the chromosomes of rodents, artiodactyls, and primates. The model predicts a parsimonious phylogenetic tree, is readily testable, and will be of considerable use for determining the pathways of mammalian evolution.

Indexed as

Chromosomes, Human, Pair 3DNA ProbesAnimalsBiological EvolutionChromosome MappingCytogeneticsGenomeHumansMammalsPhylogenyPolymorphism, Restriction Fragment LengthRatsRepetitive Sequences, Nucleic AcidDNA Probes

Identifiers

PMID8093645
PMCPMC45739
OpenAlexW2080686621

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.