Evidence map›Paper›PMID 8065939›Full record

ArticleNucleic acids research1994

Cyanine dye dUTP analogs for enzymatic labeling of DNA probes.

H Yu, J Chao, D Patek, R Mujumdar, S Mujumdar, A S Waggoner

Abstract read
In one paragraph

Article in Nucleic acids research, 1994. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. BODIPY-fused uracil: synthesis, photophysical properties, and applications.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2024
    Article
  5. Article
  6. FISH Going Meso-Scale: A Microscopic Search for Chromatin Domains.Frontiers in cell and developmental biology · 2021
    Review
  7. Article
  8. Article
  9. Article
  10. Fluorescent labelling of in situ hybridisation probes through the copper-catalysed azide-alkyne cycloaddition reaction.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2016
    Article
  11. Article
  12. The Toolbox for Modified Aptamers.Molecular biotechnology · 2016
    Review
  13. Article
  14. Rigid cyanine dye nucleic acid labels.Chemical communications (Cambridge, England) · 2008
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

H YuDepartment of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA 15213.
J Chao
D Patek
R Mujumdar
S Mujumdar
A S Waggoner

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fluorescence in situ hybridization (FISH) has become and indispensable tool in a variety of areas of research and clinical diagnostics. Many applications demand an approach for simultaneous detection of multiple target sequences that is rapid and simple, yet sensitive. In this work, we describe the synthesis of two new cyanine dye-labeled dUTP analogs, Cy3-dUTP and Cy5-dUTP. They are efficient substrates for DNA polymerases and can be incorporated into DNA probes by standard nick translation, random priming and polymerase chain reactions. Optimal labeling conditions have been identified which yield probes with 20-40 dyes per kilobase. The directly labeled DNA probes obtained with these analogs offer a simple approach for multicolor multisequence analysis that requires no secondary detection reagents and steps.

Indexed as

DNA ProbesBase SequenceCarbocyaninesChromatography, High Pressure LiquidDeoxyribonuclease IDeoxyuracil NucleotidesDNA Polymerase IFluorescent DyesGenetic TechniquesIn Situ Hybridization, FluorescenceMolecular Sequence DataPolymerase Chain Reaction3'-deoxy-5-(cyanine dye 3)uridine 5'-trisphosphate3'-deoxy-5-(cyanine dye 5)uridine 5'-trisphosphateCarbocyaninesDeoxyribonuclease IDeoxyuracil NucleotidesDNA Polymerase IDNA ProbesFluorescent Dyes

Identifiers

PMID8065939
PMCPMC310300

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.