ArticleNucleic acids research1994
Can SINEs: a family of tRNA-derived retroposons specific to the superfamily Canoidea.
Article in Nucleic acids research, 1994. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
20 citing papers in PubMed, 57 citations in OpenAlex.
- Diploid dual assemblies reveal the telocentric structure and extensive allelic heterogeneity of canine genomes.NAR genomics and bioinformatics · 2026Article
- SINE retrotransposons import polyadenylation signals to 3'UTRs in dog (Canis familiaris).Mobile DNA · 2025Article
- Tail Wags Dog's SINE: Retropositional Mechanisms of Can SINE Depend on Its A-Tail Structure.Biology · 2022Article
- Article
- Similar Evolutionary Trajectories for Retrotransposon Accumulation in Mammals.Genome biology and evolution · 2017Article
- The dynamic proliferation of CanSINEs mirrors the complex evolution of Feliforms.BMC evolutionary biology · 2014Article
- On the phylogeny of Mustelidae subfamilies: analysis of seventeen nuclear non-coding loci and mitochondrial complete genomes.BMC evolutionary biology · 2011Article
- Canine behavioral genetics: pointing out the phenotypes and herding up the genes.American journal of human genetics · 2008Review
- Canine genomics and genetics: running with the pack.PLoS genetics · 2005Review
- Evolutionary diversity and potential recombinogenic role of integration targets of Non-LTR retrotransposons.Molecular biology and evolution · 2005Article
- Evolutionary implications of multiple SINE insertions in an intronic region from diverse mammals.Mammalian genome : official journal of the International Mammalian Genome Society · 2005Article
- Characterization of an abundant short interspersed nuclear element (SINE) present in Canis familiaris.Mammalian genome : official journal of the International Mammalian Genome Society · 1998Article
- Centromeric polymerase III transcription units in Chironomus pallidivittatus.Nucleic acids research · 1996Article
- Microsatellites at a common site in the second ORF of L1 elements in mammalian genomes.Mammalian genome : official journal of the International Mammalian Genome Society · 1996Article
- DANA elements: a family of composite, tRNA-derived short interspersed DNA elements associated with mutational activities in zebrafish (Danio rerio).Proceedings of the National Academy of Sciences of the United States of America · 1996Article
- Evolution of the active sequences of the HpaI short interspersed elements.Journal of molecular evolution · 1995Article
- Nucleotide sequence of a highly repetitive element isolated from Opsariichthys uncirostris (Osteichthyes). O. uncirostris repetitive sequence.Molecular biology reports · 1995Article
- SINE elements of carnivores.Mammalian genome : official journal of the International Mammalian Genome Society · 1995Article
- Nucleotide sequence of a major satellite DNA element isolated from a saltwater fish Sillago japonica.Molecular biology reportsArticle
- Carnivore-specific SINEs (Can-SINEs): distribution, evolution, and genomic impact.The Journal of heredityReview
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Authors and funding
2 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
A repetitive element of approximately 200 bp was cloned from harbour seal (Phoca vitulina concolour) genomic DNA. The sequence of the element revealed putative RNA polymerase III control boxes, a poly A tail and direct terminal repeats characteristic of SINEs. Sequence and secondary structural similarities suggest that the SINE is derived from a tRNA, possibly tRNA-alanine. Southern blot analysis indicated that the element is predominately dispersed in unique regions of the seal genome, but may also be present in other repetitive sequences, such as tandemly arrayed satellite DNA. Based on slot-blot hybridization analysis, we estimate that 1.3 x 10(6) copies of the SINE are present in the harbour seal genome; SINE copy number based on the number of clones isolated from a size-selected library, however, is an order of magnitude lower (1-3 x 10(5) copies), an estimate consistent with the abundance of SINEs in other mammalian genomes. Database searches found similar sequences have been isolated from dog (Canis familiaris) and mink (Mustela vison). These, and the seal SINE sequences are characterized by an internal CT dinucleotide microsatellite in the tRNA-unrelated region. Hybridization of genomic DNA from representative species of a wide range of mammalian orders to an oligonucleotide (30mer) probe complementary to a conserved region of the SINE confirmed that the element is unique to carnivores of the superfamily Canoidea.
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