Evidence map›Paper›PMID 8029018›Full record

ArticleNucleic acids research1994

Allele-specific expression of a variant-specific surface protein (VSP) of Giardia lamblia.

Y Yang, R D Adam

Abstract read
In one paragraph

Article in Nucleic acids research, 1994. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Sirtuins of parasitic protozoa: in search of function(s).Molecular and biochemical parasitology · 2012
    Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Biology of Giardia lamblia.Clinical microbiology reviews · 2001
    Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Y YangInfectious Disease Section, Arizona Health Sciences Center, Tucson 85724.
R D Adam

Funding

ANTIGENIC VARIATON IN GIARDIA LAMBLIAR29AI028551 · NIAID · UNIVERSITY OF ARIZONA · PI ADAM, RODNEY D · 1990 to 1994
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NIAID NIH HHS R29-AI28551-01A1
6 · The paper itself

Abstract

The surfaces of Giardia lamblia trophozoites demonstrate variable expression of a set of cysteine-rich surface proteins, called variant-specific surface proteins (VSP). The cloned Giardia line, WBA6, expresses a 170 kD VSP (VSPA6 or CRP170) which contains approximately 18 to 23 copies of a 65 amino acid repeat. We have cloned the expressed vspA6 gene containing 23 repeats from a genomic library as well as copies of the vspA6 gene with only 8 or 9 repeats from both WBA6 and from WB1269, a cloned line derived from WBA6 which has lost the expressed copy of the gene. The recombinant clones containing the genes with only 8 or 9 repeats have 8 nucleotide substitutions in the coding region. All the recombinant clones map to the same chromosomal location, yet RNA sequencing and comparison with the transcript size indicate that only the clone with 23 repeats contains a gene producing a stable transcript. The most likely interpretation of these data is that G.lamblia trophozoites contain multiple alleles of the vspA6 gene of which only one is expressed.

Indexed as

AllelesProtozoan ProteinsAmino Acid SequenceAnimalsAntigens, ProtozoanAntigens, SurfaceBase SequenceBlotting, WesternCloning, MolecularDNA, ProtozoanExonsGene Expression RegulationGiardia lambliaIntronsMolecular Sequence DataOpen Reading FramesAntigens, ProtozoanAntigens, SurfaceDNA, ProtozoanProtozoan Proteinsvariant surface protein H7, Giardia lamblia

Identifiers

PMID8029018
PMCPMC308127

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.