Evidence map›Paper›PMID 8019128›Full record

ArticleGene expression1993

Comparative utilization of transcription factor GABP by the promoters of ribosomal protein genes rpL30 and rpL32.

R R Genuario, D E Kelley, R P Perry

Open access · greenAbstract readComparative Study
In one paragraph

Article in Gene expression, 1993. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Regulation of ribosomal protein genes: An ordered anarchy.Wiley interdisciplinary reviews. RNA · 2021
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Nuclear control of respiratory chain expression in mammalian cells.Journal of bioenergetics and biomembranes · 1997
    Review
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

R R GenuarioInstitute for Cancer Research, Fox Chase Cancer Center, Philadelphia, PA 19111.
D E Kelley
R P Perry
Fox Chase Cancer Center · US

Funding

WORD PROCESSING CENTER--COREP30CA006927 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI Margaret von Mehren · 1985 to 2026
$138.8M
TRAINING PROGRAM IN CANCER RESEARCHT32CA009035 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI CHERNOFF, JONATHAN · 1985 to 2020
$10.5M
STUDIES OF IMMUNOGLOBULIN &RIBOSOMAL PROTEIN GENESR01AI017330 · NIAID · INSTITUTE FOR CANCER RESEARCH · PI PERRY, ROBERT P · 1985 to 1995
–
NCI NIH HHS CA-06927NCI NIH HHS CA-09035-18NCI NIH HHS P30 CA006927NCI NIH HHS T32 CA009035NIAID NIH HHS AI-17330
6 · The paper itself

Abstract

The promoters of two mouse ribosomal protein genes, rpL30 and rpL32, contain a similarly located element, called beta, which was previously shown to interact with the same nuclear protein. This protein has now been identified as the GA-binding protein (GABP) on the basis of studies with recombinant GABP subunits and GABP-specific antibodies. The rpL30 element consists of two contiguous GABP binding sites that can form a tetrameric complex with two alpha and two beta 1 subunits of GABP, as well as dimeric complexes with alpha and either the beta 1 or beta 2 subunit. The rpL32 element consists of a solitary GABP binding site that can form only dimeric complexes with alpha and beta 1 or beta 2. Footprint analysis and a comparison of the effects of mutations in each of the tandem rpL30 binding sites demonstrated that the site nearest to the transcriptional start point is strongly favored for dimeric complex formation and is correspondingly more important for rpL30 promoter function. The contributions to overall promoter activity of the proximal rpL30 site and the solitary rpL32 site are virtually the same. Paradoxically, the potential for tetramer formation afforded by the tandem sites in rpL30 has a relatively minor effect on overall promoter strength. These findings illustrate the subtlety of mechanisms by which fine-tuning of rp promoters is achieved.

Indexed as

Promoter Regions, GeneticAnimalsBase SequenceBinding SitesConsensus SequenceDNA-Binding ProteinsDNA, RibosomalGA-Binding Protein Transcription FactorMiceMolecular Sequence DataRecombinant Fusion ProteinsRibosomal ProteinsTranscription FactorsTumor Cells, CulturedDNA-Binding ProteinsDNA, RibosomalGA-Binding Protein Transcription FactorGabpa protein, mouseGabpb1 protein, mouseRecombinant Fusion Proteinsribosomal protein L30ribosomal protein L32Ribosomal ProteinsTranscription Factors

Identifiers

PMID8019128
PMCPMC6081616
OpenAlexW2413301893

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.