Evidence map›Paper›PMID 7988563›Full record

ArticleThe EMBO journal1994

MAZ-dependent termination between closely spaced human complement genes.

R Ashfield, A J Patel, S A Bossone, H Brown, R D Campbell, K B Marcu, N J Proudfoot

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 1994. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 117 citations in OpenAlex.

  1. Article
  2. Article
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  4. Article
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  7. The Myc-associated zinc finger protein (MAZ) works together with CTCF to control cohesin positioning and genome organization.Proceedings of the National Academy of Sciences of the United States of America · 2021
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  9. 16p11.2 transcription factorProceedings of the National Academy of Sciences of the United States of America · 2018
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  10. Review
  11. Article
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  13. Loss-of-function thrombospondin-1 mutations in familial pulmonary hypertension.American journal of physiology. Lung cellular and molecular physiology · 2012
    Article
  14. Vezf1 protein binding sites genome-wide are associated with pausing of elongating RNA polymerase II.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  15. Article
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

R AshfieldSir William Dunn School of Pathology, University of Oxford, UK.
A J Patel
S A Bossone
H Brown
R D Campbell
K B Marcu
N J Proudfoot
University of Oxford · GB

Funding

CHROMOSOME TRANSLOCATED ONCOGENES AND NEOPLASIAR01CA036246 · NCI · STATE UNIVERSITY NEW YORK STONY BROOK · PI MARCU, KENNETH B · 1985 to 1993
–
NCI NIH HHS CA 36246Wellcome Trust
6 · The paper itself

Abstract

The zinc finger protein MAZ, originally identified as a factor that binds to the c-myc P2 promoter, is associated with transcriptional termination. As shown in these studies, a termination sequence between the closely spaced human complement genes C2 and Factor B contains a protein binding site which interacts with three different proteins in vitro. Binding of one of these factors, MAZ, correlates with activity of the C2 termination sequence in vivo. Cloned MAZ was used to obtain a consensus binding site, G5AG5. This allowed identification of new sites, between the closely spaced human genes g11 and C4 and within an intron of the mouse IgM-D gene, where termination is known to occur and regulate the expression of IgD. The g11 and IgM MAZ sites lie within sequences that have activity in a termination assay and, furthermore, mutation of C2 or g11 MAZ sites severely reduces termination activity. MAZ bends DNA, and inherently bent DNA is highly active as a terminator, suggesting that MAZ-induced bending is important for C2 and g11 termination. We propose that MAZ sites exist in promoters which require protection against transcriptional interference, such as those of closely spaced genes, to cause efficient termination. The MAZ consensus sequence will facilitate the identification of further sites.

Indexed as

Terminator Regions, GeneticZinc FingersBase SequenceComplement C2Complement System ProteinsConsensus SequenceDNADNA-Binding ProteinsHeLa CellsHumansMolecular Sequence DataMutationNucleic Acid ConformationOligodeoxyribonucleotidesPolymerase Chain ReactionProthrombinc-MYC-associated zinc finger proteinComplement C2Complement System ProteinsDNADNA-Binding ProteinsOligodeoxyribonucleotidesProthrombinRecombinant Fusion ProteinsTranscription Factors

Identifiers

PMID7988563
PMCPMC395531
OpenAlexW1879167427

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.