Evidence map›Paper›PMID 7971284›Full record

ArticleNucleic acids research1994

Developmentally regulated, low abundance Tec element transcripts in Euplotes crassus--implications for DNA elimination and transposition.

J W Jaraczewski, J S Frels, C L Jahn

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 1994. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 26 citations in OpenAlex.

  1. Evolutionary origins and impacts of genome architecture in ciliates.Annals of the New York Academy of Sciences · 2019
    Review
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  10. An unusual histone H3 specific for early macronuclear development in Euplotes crassus.Proceedings of the National Academy of Sciences of the United States of America · 1997
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

J W JaraczewskiDepartment of Cell and Molecular Biology, Northwestern University Medical School, Chicago, IL 60611.
J S Frels
C L Jahn
Northwestern University · US

Funding

GENOME REORGANIZATION DURING MACRONUCLEAR DEVELOPMENTR01GM037661 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI JAHN, CAROLYN L · 1987 to 1992
–
NIGMS NIH HHS GM37661
6 · The paper itself

Abstract

During macromolecular development in the ciliated protozoan, Euplotes crassus, > 105 Tec elements are precisely eliminated from the genome in a 2-4 h time interval, generating extrachromosomal circular forms of the elements. Various models have proposed a transposition-based mechanism for this excision. We have tested this hypothesis by determining the abundance of transcripts of Tec element open reading frames (ORFs) and the timing of their appearance. Transcripts are very low in abundance and are only detected by PCR amplification techniques. Thus, the low levels of transcripts argue against the participation of element-encoded functions in the Tec element elimination process. The element transcripts are only detected in RNA samples from mated cells, indicating that the micronucleus and/or developing macronucleus are transcriptionally active during the sexual phase of the life cycle. The transcription detected could allow a low level of germline-specific transposition for these elements.

Indexed as

Gene Expression RegulationRepetitive Sequences, Nucleic AcidAnimalsBase SequenceBlotting, NorthernBlotting, SouthernDNA, ComplementaryDNA PrimersDNA, ProtozoanDNA Transposable ElementsEuplotesMolecular Sequence DataNucleic Acid HybridizationOpen Reading FramesPolymerase Chain ReactionRNA, MessengerDNA, ComplementaryDNA PrimersDNA, ProtozoanDNA Transposable ElementsRNA, Messenger

Identifiers

PMID7971284
PMCPMC308490
OpenAlexW2006170352

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.