Evidence map›Paper›PMID 7957112›Full record

ArticleThe EMBO journal1994

A conserved upstream element is essential for transcription of the Leishmania tarentolae mini-exon gene.

R M Saito, M G Elgort, D A Campbell

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 1994. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
8.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Regulation of gene expression in protozoa parasites.Journal of biomedicine & biotechnology · 2010
    Review
  6. Gene expression in trypanosomatid parasites.Journal of biomedicine & biotechnology · 2010
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. RNA polymerase II-dependent transcription in trypanosomes is associated with a SNAP complex-like transcription factor.Proceedings of the National Academy of Sciences of the United States of America · 2003
    Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. The U5 RNA of trypanosomes deviates from the canonical U5 RNA: the Leptomonas collosoma U5 RNA and its coding gene.Proceedings of the National Academy of Sciences of the United States of America · 1997
    Article
  19. Article
  20. Control of gene expression in trypanosomes.Microbiological reviews · 1995
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

R M SaitoDepartment of Microbiology and Immunology, University of California, Los Angeles, CA 90024.
M G Elgort
D A Campbell
University of California, Los Angeles · US

Funding

NIGMS NIH HHS GM-07104
6 · The paper itself

Abstract

We demonstrate that the mini-exon genes of Leishmania tarentolae are individually transcribed by an enzyme pharmacologically identified as RNA polymerase II. To study transcription in these ancient eukaryotes, a stable transformation assay using an episomal mini-exon gene was developed. The introduced mini-exon gene, which had been marked with a 40 bp tag, yielded the predicted tagged transcript. An upstream cis-acting element that was essential for transcription of the mini-exon gene was identified by site-directed mutagenesis. Block substitution mutagenesis of the -1 to +9 and +10 to +19 regions of the exon results in 20- to 100-fold decreased levels of the tagged transcript in steady-state RNA. However, since these two mutations resulted in only a 2- to 3-fold decrease in nascent RNA levels, steady-state levels appear to be affected greatest by the stability of the resulting transcript. In contrast, mutation of the -67/-58 region resulted in undetectable levels of both steady-state and nascent RNA from the introduced gene. We conclude, therefore, that this upstream element, which is highly conserved in all Leishmania species, is a component of the mini-exon gene promoter.

Indexed as

Gene Expression RegulationPromoter Regions, GeneticTranscription, GeneticAnimalsBase SequenceExonsGenes, SyntheticGenetic VectorsLeishmaniaMolecular Sequence DataMutagenesis, Site-DirectedRepetitive Sequences, Nucleic AcidRNA CapsRNA, MessengerRNA Polymerase IIRNA, ProtozoanRNA CapsRNA, MessengerRNA Polymerase IIRNA, Protozoan

Identifiers

PMID7957112
PMCPMC395504
OpenAlexW13855857

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.