Evidence map›Paper›PMID 7937859›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1994

Removal of transducer HtrI allows electrogenic proton translocation by sensory rhodopsin I.

R A Bogomolni, W Stoeckenius, I Szundi, E Perozo, K D Olson, J L Spudich

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1994. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 102 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Mechanism divergence in microbial rhodopsins.Biochimica et biophysica acta · 2014
    Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. An inward proton transport using Anabaena sensory rhodopsin.Journal of microbiology (Seoul, Korea) · 2011
    Review
  10. Article
  11. Article
  12. A Schiff base connectivity switch in sensory rhodopsin signaling.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
  13. Article
  14. Three strategically placed hydrogen-bonding residues convert a proton pump into a sensory receptor.Proceedings of the National Academy of Sciences of the United States of America · 2006
    Article
  15. Article
  16. Article
  17. Article
  18. Electrophysiological characterization of specific interactions between bacterial sensory rhodopsins and their transducers.Proceedings of the National Academy of Sciences of the United States of America · 2001
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

R A BogomolniDepartment of Chemistry and Biochemistry, University of California, Santa Cruz 95064.
W Stoeckenius
I Szundi
E Perozo
K D Olson
J L Spudich
University of California, Santa Cruz · US

Funding

Structure/Function of Microbial Sensory RhodopsinsR01GM027750 · NIGMS · YESHIVA UNIVERSITY · PI SPUDICH, JOHN LEE · 1985 to 2020
$6.6M
Structure/Function of Microbial Sensory RhodopsinsR37GM027750 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI SPUDICH, JOHN LEE · 2003 to 2012
$6.0M
NIGMS NIH HHS GM 27750NIGMS NIH HHS GM 43561
6 · The paper itself

Abstract

Sensory rhodopsin I (sR-I) is a phototaxis receptor in halobacteria, which is closely related to the light-driven proton pump bacteriorhodopsin and the chloride pump halorhodopsin found in the same organisms. The three pigments undergo similar cyclic photoreactions, in spite of their different functions. In intact cells or isolated membranes sR-I is complexed with protein HtrI, the next link in the signal transduction chain, and does not function as an electrogenic ion pump. However, illumination of sR-I in membranes lacking HtrI causes pH changes in the medium, and its photoreaction kinetics become pH-dependent. We show here that in closed vesicles, near neutral pH it functions as an electrogenic proton pump capable of generating at least -80 mV transmembrane potential. The action spectrum shows a maximum 37 nm below the 587-nm absorption maximum of the native pigment. This apparent discrepancy occurs because the 587-nm form of HtrI-free sR-I exists in a pH-dependent equilibrium with a 550-nm absorbing species generated through deprotonation of one group with a pKa of 7.2, which we have tentatively identified as Asp-76. We interpret the results in terms of a general model for ion translocation by the bacterial rhodopsins.

Indexed as

Archaeal ProteinsHalorhodopsinsSensory RhodopsinsBacterial ProteinsBacteriorhodopsinsCell MembraneDarknessHalobacteriumHydrogen-Ion ConcentrationKineticsLightMembrane PotentialsMembrane ProteinsModels, BiologicalSignal TransductionThermodynamicsArchaeal ProteinsBacterial ProteinsBacteriorhodopsinsHalorhodopsinshtrI protein, Halobacterium salinariumMembrane ProteinsSensory RhodopsinsSRI protein, Halobacterium

Identifiers

PMID7937859
PMCPMC44983
OpenAlexW1978545530

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.