Evidence map›Paper›PMID 7935460›Full record

ArticleMolecular and cellular biology1994

Differential effects of Cdc68 on cell cycle-regulated promoters in Saccharomyces cerevisiae.

D Lycan, G Mikesell, M Bunger, L Breeden

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 1994. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 44 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

D LycanLewis and Clark College, Portland, Oregon 97219.
G Mikesell
M Bunger
L Breeden
Fred Hutch Cancer Center · USLewis & Clark College · US

Funding

CELL CYCLE REGULATION OF THE YEAST HO GENER01GM041073 · NIGMS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BREEDEN, LINDA L. · 1994 to 2010
$5.4M
MECHANISM OF SW14/SW16 REGULATED TRANSCRIPTIONR15GM050995 · NIGMS · LEWIS AND CLARK COLLEGE · PI LYCAN, DEBORAH E · 1994 to 1994
–
CELL CYCLE REGULATION OF THE YEAST HO GENER29GM041073 · NIGMS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BREEDEN, LINDA L. · 1989 to 1993
–
NIGMS NIH HHS GM41073NIGMS NIH HHS GM50995
6 · The paper itself

Abstract

Swi4 and Swi6 form a complex which is required for Start-dependent activation of HO and for high-level expression of G1 cyclin genes CLN1 and CLN2. To identify other regulators of this pathway, we screened for dominant, recessive, conditional, and allele-specific suppressors of swi4 mutants. We isolated 16 recessive suppressors that define three genes, SSF1, SSF5, and SSF9 (suppressor of swi four). Mutations in all three genes bypass the requirement for both Swi4 and Swi6 for HO transcription and activate transcription from reporter genes lacking upstream activating sequences (UASs). SSF5 is allelic with SIN4 (TSF3), a gene implicated in global repression of transcription and chromatin structure, and SSF9 is likely to be a new global repressor of transcription. SSF1 is allelic with CDC68 (SPT16). cdc68 mutations have been shown to increase expression from defective promoters, while preventing transcription from other intact promoters, including CLN1 and CLN2. We find that CDC68 is a required activator of both SWI4 and SWI6, suggesting that CDC68's role at the CLN promoters may be indirect. The target of CDC68 within the SWI4 promoter is complex in that known activating elements (MluI cell cycle boxes) in the SWI4 promoter are required for CDC68 dependence but only within the context of the full-length promoter. This result suggests that there may be both a chromatin structure and a UAS-specific component to Cdc68 function at SWI4. We suggest that Cdc68 functions both in the assembly of repressive complexes that form on many intact promoters in vivo and in the relief of this repression during gene activation.

Indexed as

Cell Cycle ProteinsGenes, FungalSaccharomyces cerevisiae ProteinsTranscription FactorsBase SequenceCell CycleCloning, MolecularDNA, FungalFungal ProteinsGenes, RecessiveGenes, SuppressorGenetic Complementation TestMutationPromoter Regions, GeneticSaccharomyces cerevisiaeTranscriptional Elongation FactorsCell Cycle ProteinsDNA, FungalFungal ProteinsSaccharomyces cerevisiae ProteinsSPT16 protein, S cerevisiaeTranscriptional Elongation FactorsTranscription Factors

Identifiers

PMID7935460
PMCPMC359281
OpenAlexW2152838309

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.