Evidence map›Paper›PMID 7935446›Full record

ArticleMolecular and cellular biology1994

Cap-dependent and cap-independent translation by internal initiation of mRNAs in cell extracts prepared from Saccharomyces cerevisiae.

N Iizuka, L Najita, A Franzusoff, P Sarnow

Open access · greenAbstract readComparative Study
In one paragraph

Article in Molecular and cellular biology, 1994. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 132 papers.

0numbers the graph read from it
0cells of the map it votes in
132citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

132 citing papers in PubMed, 274 citations in OpenAlex.

  1. Review
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  11. Functional Cyclization of Eukaryotic mRNAs.International journal of molecular sciences · 2020
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Cap-Independent mRNA Translation in Germ Cells.International journal of molecular sciences · 2019
    Review
  17. Article
  18. Article
  19. Article
  20. Article

72 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

N IizukaDepartment of Biochemistry, Biophysics and Genetics, University of Colorado Health Sciences Center, Denver 80262.
L Najita
A Franzusoff
P Sarnow
University of Colorado Health · USUniversity of Colorado Anschutz Medical Campus · US

Funding

STRUCTURE/FUNCTION OF THE POLIOVIRUS RNA GENOMER01AI025105 · NIAID · UNIVERSITY OF COLORADO DENVER · PI SARNOW, PETER · 1992 to 2002
$742k
STRUCTURE/FUNCTION OF PICORNAVIRUS RNA GENOMESR21AI025105 · NIAID · STANFORD UNIVERSITY · PI SARNOW, PETER · 1997 to 1997
–
STRUCTURE AND FUNCTION OF THE POLIOVIRUS RNA GENOMER29AI025105 · NIAID · UNIVERSITY OF COLORADO DENVER · PI SARNOW, PETER · 1987 to 1991
–
NIAID NIH HHS AI25105
6 · The paper itself

Abstract

Translation extracts were prepared from various strains of Saccharomyces cerevisiae. The translation of mRNA molecules in these extracts were cooperatively enhanced by the presence of 5'-terminal cap structures and 3'-terminal poly(A) sequences. These cooperative effects could not be observed in other translation systems such as those prepared from rabbit reticulocytes, wheat germ, and human HeLa cells. Because the yeast translation system mimicked the effects of the cap structure and poly(A) tail on translational efficiency seen in vivo, this system was used to study cap-dependent and cap-independent translation of viral and cellular mRNA molecules. Both the 5' noncoding regions of hepatitis C virus and those of coxsackievirus B1 conferred cap-independent translation to a reporter coding region during translation in the yeast extracts; thus, the yeast translational apparatus is capable of initiating cap-independent translation. Although the translation of most yeast mRNAs was cap dependent, the unusually long 5' noncoding regions of mRNAs encoding cellular transcription factors TFIID and HAP4 were shown to mediate cap-independent translation in these extracts. Furthermore, both TFIID and HAP4 5' noncoding regions mediated translation of a second cistron when placed into the intercistronic spacer region of a dicistronic mRNA, indicating that these leader sequences can initiate translation by an internal ribosome binding mechanism in this in vitro translation system. This finding raises the possibility that an internal translation initiation mechanism exists in yeast cells for regulated translation of endogenous mRNAs.

Indexed as

CCAAT-Binding FactorSaccharomyces cerevisiae ProteinsAnimalsBase SequenceCell-Free SystemDNA, FungalDNA PrimersEnterovirusFungal ProteinsHumansIn Vitro TechniquesMolecular Sequence DataProtein BiosynthesisRibosomesRNA CapsRNA, FungalCCAAT-Binding FactorDNA, FungalDNA PrimersFungal ProteinsHAP4 protein, S cerevisiaeRNA CapsRNA, FungalRNA, MessengerSaccharomyces cerevisiae ProteinsTranscription FactorsTranscription Factor TFIID

Identifiers

PMID7935446
PMCPMC359267
OpenAlexW2163977024

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.