Evidence map›Paper›PMID 7908117›Full record

ArticleMolecular and cellular biology1994

Identification and characterization of Drosophila relatives of the yeast transcriptional activator SNF2/SWI2.

L K Elfring, R Deuring, C M McCallum, C L Peterson, J W Tamkun

Open access · greenAbstract readComparative Study
In one paragraph

Article in Molecular and cellular biology, 1994. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 80 papers.

0numbers the graph read from it
0cells of the map it votes in
80citing papers in PubMed
9.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

80 citing papers in PubMed, 201 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Chromatin regulation and dynamics in stem cells.Current topics in developmental biology · 2020
    Review
  8. The BAF complex in development and disease.Epigenetics & chromatin · 2019
    Review
  9. Review
  10. Article
  11. Polycomb and trithorax opposition in development and disease.Wiley interdisciplinary reviews. Developmental biology · 2016
    Review
  12. Review
  13. Chromatin remodelers: We are the drivers!!Nucleus (Austin, Tex.) · 2016
    Review
  14. Review
  15. Review
  16. The role of BAF (mSWI/SNF) complexes in mammalian neural development.American journal of medical genetics. Part C, Seminars in medical genetics · 2014
    Article
  17. Article
  18. Nucleosome remodeling and epigenetics.Cold Spring Harbor perspectives in biology · 2013
    Review
  19. Review
  20. Article

20 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

L K ElfringDepartment of Biology, University of California, Santa Cruz 95064.
R Deuring
C M McCallum
C L Peterson
J W Tamkun
University of California, Santa Cruz · US

Funding

Analysis of the yeast SWI1, SWI2, and SWI3 proteinsR37GM049650 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI PETERSON, CRAIG L · 2006 to 2015
$4.9M
YEAST SWI1, SWI2, AND SWI3 PROTEINSR01GM049650 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI PETERSON, CRAIG L · 1993 to 2016
$2.6M
NIGMS NIH HHS R01 GM049650NIGMS NIH HHS R37 GM049650
6 · The paper itself

Abstract

The Drosophila brahma (brm) gene encodes an activator of homeotic genes that is highly related to the yeast transcriptional activator SWI2 (SNF2), a potential helicase. To determine whether brm is a functional homolog of SWI2 or merely a member of a family of SWI2-related genes, we searched for additional Drosophila genes related to SWI2 and examined their function in yeast cells. In addition to brm, we identified one other Drosophila relative of SWI2: the closely related ISWI gene. The 1,027-residue ISWI protein contains the DNA-dependent ATPase domain characteristic of the SWI2 protein family but lacks the three other domains common to brm and SWI2. In contrast, the ISWI protein is highly related (70% identical) to the human hSNF2L protein over its entire length, suggesting that they may be functional homologs. The DNA-dependent ATPase domains of brm and SWI2, but not ISWI, are functionally interchangeable; a chimeric SWI2-brm protein partially rescued the slow growth of swi2- cells and supported transcriptional activation mediated by the glucocorticoid receptor in vivo in yeast cells. These findings indicate that brm is the closest Drosophila relative of SWI2 and suggest that brm and SWI2 play similar roles in transcriptional activation.

Indexed as

Cell Cycle ProteinsDNA HelicasesGenes, HomeoboxNuclear ProteinsAdenosine TriphosphatasesAmino Acid SequenceAnimalsBase SequenceDNA-Binding ProteinsDNA PrimersDrosophilaDrosophila ProteinsEmbryo, NonmammalianIn Situ HybridizationMolecular Sequence DataPolymerase Chain ReactionAdenosine Triphosphatasesbrm protein, DrosophilaCell Cycle ProteinsDNA-Binding ProteinsDNA HelicasesDNA PrimersDrosophila ProteinsISWI proteinNuclear ProteinsRNA, MessengerSaccharomyces cerevisiae ProteinsSNF2 protein, S cerevisiaeTrans-ActivatorsTranscription Factors

Identifiers

PMID7908117
PMCPMC358589
OpenAlexW2129846268

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.