Evidence map›Paper›PMID 7892233›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1995

A method for probing the topography and interactions of proteins: footprinting of myoglobin.

M Zhong, L Lin, N R Kallenbach

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1995. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Oxidative protein labeling in mass-spectrometry-based proteomics.Analytical and bioanalytical chemistry · 2010
    Review
  6. Isotope-coded affinity tags with tunable reactivities for protein footprinting.Angewandte Chemie (International ed. in English) · 2008
    Article
  7. Conformational properties of native sperm whale apomyoglobin in solution.Protein science : a publication of the Protein Society · 1999
    Article
  8. Article
  9. Proteolytic mapping of heat shock transcription factor domains.Protein science : a publication of the Protein Society · 1996
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

M ZhongDepartment of Chemistry, New York University, NY 10003.
L Lin
N R Kallenbach

Funding

SPECIFICITY IN FRAMESHIFT MUTAGENESISR01CA024101 · NCI · UNIVERSITY OF PENNSYLVANIA · PI KALLENBACH, NEVILLE R · 1985 to 2000
$40k
DETERMINANTS OF TERTIARY STRUCTURE IN MYOGLOBINSR01GM040746 · NIGMS · NEW YORK UNIVERSITY · PI KALLENBACH, NEVILLE R · 1989 to 1997
–
NCI NIH HHS CA 24101NIGMS NIH HHS GM 40746
6 · The paper itself

Abstract

We describe a procedure for mapping residues on the surface of a protein molecule to its sequence, using a scheme that is analogous to nucleic acid footprinting. The protein is end labeled radioactively and subjected to limited proteolysis, and the products are analyzed by denaturing polyacrylamide gel electrophoresis and autoradiography. The method is tested with the heme protein myoglobin and applied to mapping the (unknown) surface of the molecule lacking the heme group: apomyoglobin. Sites of protein-protein interaction can be identified, as illustrated by footprinting the association between myoglobin and an anti-myoglobin monoclonal antibody.

Indexed as

Protein Structure, SecondaryAdenosine TriphosphateAmino Acid SequenceAnimalsAntibodies, MonoclonalApoproteinsBinding SitesCattleCloning, MolecularEndopeptidasesEscherichia coliIsotope LabelingModels, MolecularMolecular Sequence DataMyocardiumMyoglobinAdenosine TriphosphateAntibodies, MonoclonalapomyoglobinApoproteinsEndopeptidasesMyoglobinPhosphorus RadioisotopesProtein KinasesProteinsRecombinant Proteins

Identifiers

PMID7892233
PMCPMC42433

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.