Evidence map›Paper›PMID 7887419›Full record

ArticleAmerican journal of human genetics1995

Batten disease gene, CLN3: linkage disequilibrium mapping in the Finnish population, and analysis of European haplotypes.

H M Mitchison, A M O'Rawe, P E Taschner, L A Sandkuijl, P Santavuori, N de Vos, M H Breuning, S E Mole, R M Gardiner, I E Järvelä

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In one paragraph

Article in American journal of human genetics, 1995. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Article
  7. The CLN3 gene and protein: What we know.Molecular genetics & genomic medicine · 2019
    Review
  8. Article
  9. Review
  10. The genetic spectrum of human neuronal ceroid-lipofuscinoses.Brain pathology (Zurich, Switzerland) · 2004
    Review
  11. Genetics of inherited human epilepsies.Dialogues in clinical neuroscience · 2001
    Article
  12. Juvenile neuronal ceroid lipofuscinosis.Indian journal of pediatrics · 2000
    Article
  13. Spectrum of mutations in the Batten disease gene, CLN3.American journal of human genetics · 1997
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

H M MitchisonDepartment of Paediatrics, University College London Medical School, United Kingdom.
A M O'Rawe
P E Taschner
L A Sandkuijl
P Santavuori
N de Vos
M H Breuning
S E Mole
R M Gardiner
I E Järvelä
University College London · GB

Funding

Wellcome Trust
6 · The paper itself

Abstract

The gene for Batten disease (juvenile-onset neuronal ceroid lipofuscinosis, or Spielmeyer-Sjögren disease), CLN3, maps to 16p11.2-12.1. Four microsatellite markers--D16S288, D16S299, D16S298, and SPN--are in strong linkage disequilibrium with CLN3 in 142 families from 16 different countries. These markers span a candidate region of approximately 2.1 cM. CLN3 is most prevalent in northern European populations and is especially enriched in the isolated Finnish population, with an incidence of 1:21,000. Linkage disequilibrium mapping was applied to further refine the localization of CLN3 in 27 Finnish families by using linkage disequilibrium data and information about the population history of Finland to estimate the distance of the closest markers from CLN3. CLN3 is predicted to lie 8.8 kb (range 6.3-13.8 kb) from D16S298 and 165.4 kb (132.4-218.1 kb) from D16S299. Enrichment of allele "6" at D16S298 (on 96% of Finnish and 92% of European CLN3 chromosomes) provides strong evidence that the same major mutation is responsible for Batten disease in Finland as in most other European countries and that it is therefore not a Finnish mutation. Genealogical studies show that Batten disease is widespread throughout the densely populated regions of Finland. The ancestors of two Finnish patients carrying rare alleles "3" and "5" at D16S298 in heterozygous form originate from the southwestern coast of Finland, and these probably represent other foreign mutations. Analysis of the number and distribution of CLN3 haplotypes from 12 European countries provides evidence that more than one mutation has arisen in Europe.

Indexed as

Linkage DisequilibriumChromosome MappingFinlandHaplotypesHumansLod ScoreNeuronal Ceroid-Lipofuscinoses

Identifiers

PMID7887419
PMCPMC1801171
OpenAlexW158894911

What OpenQuestion holds

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Read underepoch 390

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.