Evidence map›Paper›PMID 7862145›Full record

ArticleMolecular and cellular biology1995

The PAX3-FKHR fusion protein created by the t(2;13) translocation in alveolar rhabdomyosarcomas is a more potent transcriptional activator than PAX3.

W J Fredericks, N Galili, S Mukhopadhyay, G Rovera, J Bennicelli, F G Barr, F J Rauscher

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 1995. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 118 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
118citing papers in PubMed, 1 pooled it
21.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

118 citing papers in PubMed, 1 synthesis or guideline pooled it, 305 citations in OpenAlex.

  1. Association between p53 codon 72 polymorphism and sarcoma risk among Caucasians.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
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  15. Immunohistochemical detection of PAX-FOXO1 fusion proteins in alveolar rhabdomyosarcoma using breakpoint specific monoclonal antibodies.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2021
    Article
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58 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

W J FredericksWistar Institute, University of Pennsylvania School of Medicine, Philadelphia 19104.
N Galili
S Mukhopadhyay
G Rovera
J Bennicelli
F G Barr
F J Rauscher
University of Pennsylvania · USThe Wistar Institute · US

Funding

T(2--13) OF ALVEOLAR RHABDOMYOSARCOMAR01CA064202 · NCI · UNIVERSITY OF PENNSYLVANIA · PI BARR, FREDERIC G · 1994 to 2007
$3.1M
TUMOR PROCUREMENT COREP01CA047983 · NCI · WISTAR INSTITUTE · PI ROVERA, GIOVANNI · 1988 to 1993
–
VIRUSES AND ONCOGENES IN HEMATOPOIETIC MALIGNANCIESP01CA052009 · NCI · WISTAR INSTITUTE · PI REDDY, E PREMKUMAR · 1991 to 1995
–
NCI NIH HHS CA 47983NCI NIH HHS CA 52009NCI NIH HHS CA 64202
6 · The paper itself

Abstract

Alveolar rhabdomyosarcomas are pediatric solid tumors with a hallmark cytogenetic abnormality: translocation of chromosomes 2 and 13 [t(2;13) (q35;q14)]. The genes on each chromosome involved in this translocation have been identified as the transcription factor-encoding genes PAX3 and FKHR. The NH2-terminal paired box and homeodomain DNA-binding domains of PAX3 are fused in frame to COOH-terminal regions of the chromosome 13-derived FKHR gene, a novel member of the forkhead DNA-binding domain family. To determine the role of the fusion protein in transcriptional regulation and oncogenesis, we identified the PAX3-FKHR fusion protein and characterized its function(s) as a transcription factor relative to wild-type PAX3. Antisera specific to PAX3 and FKHR were developed and used to examine PAX3 and PAX3-FKHR expression in tumor cell lines. Sequential immunoprecipitations with anti-PAX3 and anti-FKHR sera demonstrated expression of a 97-kDa PAX3-FKHR fusion protein in the t(2;13)-positive rhabdomyosarcoma Rh30 cell line and verified that a single polypeptide contains epitopes derived from each protein. The PAX3-FKHR protein was localized to the nucleus in Rh30 cells, as was wild-type PAX3, in t(2;13)-negative A673 cells. In gel shift assays using a canonical PAX binding site (e5 sequence), we found that DNA binding of PAX3-FKHR was significantly impaired relative to that of PAX3 despite the two proteins having identical PAX DNA-binding domains. However, the PAX3-FKHR fusion protein was a much more potent transcriptional activator than PAX3 as determined by transient cotransfection assays using e5-CAT reporter plasmids. The PAX3-FKHR protein may function as an oncogenic transcription factor by enhanced activation of normal PAX3 target genes.

Indexed as

Chromosomes, Human, Pair 13Chromosomes, Human, Pair 2Translocation, GeneticAnimalsBase SequenceBinding SitesCell LineCell NucleusChlorocebus aethiopsDNA-Binding ProteinsForkhead Box Protein O1Forkhead Transcription FactorsGene ExpressionHumansLung NeoplasmsMolecular Sequence DataDNA-Binding ProteinsForkhead Box Protein O1Forkhead Transcription FactorsFOXO1 protein, humanOligonucleotide ProbesOncogene Proteins, FusionPaired Box Transcription FactorsPAX3 protein, humanPax3 protein, mousePAX3 Transcription FactorTranscription Factors

Identifiers

PMID7862145
PMCPMC230376
OpenAlexW2142784023

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.