Evidence map›Paper›PMID 7849397›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society1994

Characterization of six new loci within the swine major histocompatibility complex class III region.

M Nunes, L Peelman, M Vaiman, N Bourgeaux, P Chardon

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 1994. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.0field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Mapping of the melatonin receptor 1a (MTNR1A) gene in pigs, sheep, and cattle.Mammalian genome : official journal of the International Mammalian Genome Society · 1997
    Article
  4. Construction of a swine YAC library allowing an efficient recovery of unique and centromeric repeated sequences.Mammalian genome : official journal of the International Mammalian Genome Society · 1997
    Article
  5. Swine cytosolic malic enzyme: cDNA cloning, sequencing, and localization.Mammalian genome : official journal of the International Mammalian Genome Society · 1996
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

M NunesLaboratoire de Radiobiologie Appliquée, INRA-CEA, DSV, DPTE, Jouy-en-Josas, France.
L Peelman
M Vaiman
N Bourgeaux
P Chardon
Commissariat à l'Énergie Atomique et aux Énergies Alternatives · FRInstitut National de la Recherche Agronomique · MAInstituut voor Landbouw en Visserijonderzoek · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A search for new potential coding sequences was conducted within two overlapping cosmid genomic DNA clusters of about 170 and 45 kb from the swine major histocompatibility complex class III region. The sequences were detected with various probes, including pools of swine cDNA, homologous and heterologous genomic sequences, and synthetic oligonucleotides. The 170 kb cluster was centered on the tumor necrosis factor genes (TNF), and the 45 kb cluster contained the heat-shock protein 70 genes (HSP70). The TNF cluster revealed the presence of five new genes: lymphotoxin beta, BAT1, BAT2, BAT3, and a sequence related to DNA-binding factors. No sequence homologous to B144 was found in the TNF cluster, although other unidentified coding sequences may be present in this cluster. The HSP70 cluster contained a gene identified as BAT6, that is, tRNA-valyl synthetase. These results provide new evidence that the genomic maps of these various genes in the TNF and HSP70 sub-regions are similar in swine and human.

Indexed as

Chromosome MappingMajor Histocompatibility ComplexMultigene FamilyAnimalsBase SequenceCosmidsDNA, ComplementaryHSP70 Heat-Shock ProteinsHumansLymphotoxin-alphaLymphotoxin-betaMembrane ProteinsMolecular Sequence DataSequence AlignmentSpecies SpecificitySwineDNA, ComplementaryHSP70 Heat-Shock ProteinsLTB protein, humanLymphotoxin-alphaLymphotoxin-betaMembrane ProteinsTumor Necrosis Factor-alphaValine-tRNA Ligase

Identifiers

PMID7849397
OpenAlexW2051985711

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.