Evidence map›Paper›PMID 7849394›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society1994

Rapid and efficient construction of yeast artificial chromosome contigs in the mouse genome with interspersed repetitive sequence PCR (IRS-PCR): generation of a 5-cM, > 5 megabase contig on mouse chromosome 1.

K W Hunter, S D Ontiveros, M L Watson, V P Stanton, P Gutierrez, D Bhat, J Rochelle, S Graw, C Ton, M Schalling

Abstract read
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In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 1994. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Characterization of an abundant short interspersed nuclear element (SINE) present in Canis familiaris.Mammalian genome : official journal of the International Mammalian Genome Society · 1998
    Article
  5. Isolation of monochromosomal hybrids for mouse chromosomes 3, 6, 10, 12, 14, and 18.Mammalian genome : official journal of the International Mammalian Genome Society · 1997
    Article
  6. Isolation and mapping of three STSs on mouse chromosome 19.Mammalian genome : official journal of the International Mammalian Genome Society · 1996
    Article
  7. Generation and mapping of Mus spretus strain-specific markers for rapid genomic scanning.Mammalian genome : official journal of the International Mammalian Genome Society · 1996
    Article
  8. Mapping of murine YACs containing the genes Cea2 and Cea4 after B1-PCR amplification and FISH-analysis.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 1995
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

K W HunterCenter for Cancer Research, Massachusetts Institute of Technology, Cambridge 02139.
S D Ontiveros
M L Watson
V P Stanton
P Gutierrez
D Bhat
J Rochelle
S Graw
C Ton
M Schalling

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007171 · NIGMS · DUKE UNIVERSITY · PI KONTOS, CHRISTOPHER D · 1985 to 2021
$31.2M
EXON SCANNING FOR THE MYOTONIC DYSTROPHY GENEF32GM014788 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI HUNTER, KENT W · 1992 to 1993
–
MAMMALIAN GENOME MAPPING OF TISSUE-SPECIFIC CDNASR01HG000734 · NHGRI · UNIVERSITY OF CALIFORNIA DAVIS · PI SELDIN, MICHAEL F. · 1993 to 1999
–
NHGRI NIH HHS HG 00734NIGMS NIH HHS 1F32 GM-14788-01NIGMS NIH HHS T32 GM-07171
6 · The paper itself

Abstract

We have developed a new technique for the generation of YAC contigs in the mouse genome that is based on the ability to detect overlapping clones by hybridization of shared IRS-PCR products. As a demonstration of the technique, a 5-cM, > 5 megabase contig was developed on the distal half of mouse Chromosome (Chr) 1, spanning the region from Lamb2 to At3. The contig covers roughly 5% of the genetic distance of the chromosome and is comprised of more than 80 clones; 71 probes were assigned physical order to the chromosome, of which 59 were new markers generated in this study. Eight of the new probes were shown to be polymorphic between C3H/HeJ-gld and M. spretus. Three probes were mapped on a [(C3H/HeJ-gld x M. spretus) x C3H/HeJ-gld] interspecific backcross to integrate the physical map with a high-resolution genetic map of the region.

Indexed as

Repetitive Sequences, Nucleic AcidAnimalsBase SequenceChromosome MappingChromosomes, Artificial, YeastCloning, MolecularCrosses, GeneticDNA PrimersElectrophoresis, Gel, Pulsed-FieldFemaleGenetic LinkageGenetic MarkersGenomeMaleMiceMice, Inbred C3HDNA PrimersGenetic Markers

Identifiers

PMID7849394

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.