Evidence map›Paper›PMID 7814537›Full record

ArticleJournal of clinical microbiology1994

Rendering of mycobacteria safe for molecular diagnostic studies and development of a lysis method for strand displacement amplification and PCR.

P Zwadyk, J A Down, N Myers, M S Dey

Abstract readComparative Study
In one paragraph

Article in Journal of clinical microbiology, 1994. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Discrimination betweenOne health (Amsterdam, Netherlands) · 2026
    Article
  2. Review
  3. Article
  4. Rapid Identification ofFrontiers in microbiology · 2022
    Article
  5. Article
  6. Article
  7. Heat Inactivation Renders Sputum Safe and PreservesJournal of clinical microbiology · 2019
    Article
  8. Genomic characterization ofMicrobial genomics · 2016
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

P ZwadykVeterans Affairs Medical Center, Durham, North Carolina 27705.
J A Down
N Myers
M S Dey

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Two criteria must be met before mycobacterial specimens can be tested by DNA amplification methods: (i) the sample must be rendered noninfectious, and (ii) the organisms must be lysed to free the DNA. Previous publications reporting DNA amplification of mycobacteria have concentrated on lysis and amplification procedures and have not addressed the issue of sample safety. We have shown that heating of samples below 100 degrees C may not consistently kill mycobacteria; however, heating at 100 degrees C in a boiling-water bath or a forced-air oven for a minimum of 5 min kills mycobacteria, including Mycobacterium thermoresistibile. Furthermore, heating at 100 degrees C for 30 min consistently lyses mycobacteria to produce short fragments of DNA that are suitable for amplification by PCR and strand displacement amplification. This procedure works with clinical samples digested by the n-acetyl cysteine-NaOH method as well as with suspensions of organisms in phosphate buffer. This paper also demonstrates the feasibility of using strand displacement amplification with clinical specimens.

Indexed as

BacteriolysisNucleic Acid Amplification TechniquesPolymerase Chain ReactionAcetylcysteineBase SequenceBuffersContainment of BiohazardsDisinfectantsDNA, BacterialFeasibility StudiesHot TemperatureHumansMolecular Sequence DataMycobacteriumMycobacterium InfectionsSafetyAcetylcysteineBuffersDisinfectantsDNA, BacterialSodium Hydroxide

Identifiers

PMID7814537
PMCPMC263956

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.