Evidence map›Paper›PMID 7791799›Full record

ArticleMolecular and cellular biology1995

A 15-base-pair element activates the SPS4 gene midway through sporulation in Saccharomyces cerevisiae.

S R Hepworth, L K Ebisuzaki, J Segall

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Article in Molecular and cellular biology, 1995. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

S R HepworthDepartment of Biochemistry, University of Toronto, Ontario, Canada.
L K Ebisuzaki
J Segall
University of Toronto · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sporulation of the yeast Saccharomyces cerevisiae represents a simple developmental process in which the events of meiosis and spore wall formation are accompanied by the sequential activation of temporally distinct classes of genes. In this study, we have examined expression of the SPS4 gene, which belongs to a group of genes that is activated midway through sporulation. We mapped the upstream boundary of the regulatory region of SPS4 by monitoring the effect of sequential deletions of 5'-flanking sequence on expression of plasmid-borne versions of SPS4 introduced into a MATa/MAT alpha delta sps4/delta sps4 strain. This analysis indicated that the 5' boundary of the regulatory region was within 50 bp of the putative TATA box of the gene. By testing various oligonucleotides that spanned this boundary and the downstream sequence for their ability to activate expression of a heterologous promoter, we found that a 15-bp sequence sufficed to act as a sporulation-specific upstream activation sequence. This 15-bp fragment, designated UASSPS4, activated expression of a CYC1-lacZ reporter gene midway through sporulation and was equally active in both orientations. Extending the UAS fragment to include the adjacent 14-bp enhanced its activity 10-fold. We show that expression of SPS4 is regulated in a manner distinct from that of early meiotic genes: mutation of UME6 did not lead to vegetative expression of SPS4, and sporulation-specific expression was delayed by mutation of IME2. In vivo and in vitro assays suggested that a factor present in vegetative cells bind to the UASSPS4 element. We speculate that during sporulation this factor is modified to serve as an activator of the SPS4 gene or, alternatively, that it recruits an activator to the promoter.

Indexed as

Cell Cycle ProteinsGene Expression Regulation, FungalRepressor ProteinsSaccharomyces cerevisiae ProteinsBase SequenceDeoxyribonucleotidesDNA-Binding ProteinsDNA, FungalDNA Mutational AnalysisFungal ProteinsGenes, FungalIntracellular Signaling Peptides and ProteinsMeiosisMolecular Sequence DataNuclear ProteinsPromoter Regions, GeneticCell Cycle ProteinsDeoxyribonucleotidesDNA-Binding ProteinsDNA, FungalFungal ProteinsIME1 protein, S cerevisiaeIME2 protein, S cerevisiaeIntracellular Signaling Peptides and ProteinsNuclear ProteinsProtein KinasesProtein Serine-Threonine KinasesRepressor ProteinsSaccharomyces cerevisiae ProteinsSPS4 protein, S cerevisiaeSSP1 protein, S cerevisiaeTranscription FactorsUME6 protein, S cerevisiae

Identifiers

PMID7791799
PMCPMC230633
OpenAlexW2148541350

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.