Evidence map›Paper›PMID 7768866›Full record

ArticleJournal of bacteriology1995

Porin activity and sequence analysis of a 31-kilodalton Treponema pallidum subsp. pallidum rare outer membrane protein (Tromp1).

D R Blanco, C I Champion, M M Exner, H Erdjument-Bromage, R E Hancock, P Tempst, J N Miller, M A Lovett

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 1995. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
5.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 52 citations in OpenAlex.

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  8. Review
  9. Molecular basis of bacterial outer membrane permeability revisited.Microbiology and molecular biology reviews : MMBR · 2003
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

D R BlancoDepartment of Microbiology and Immunology, School of Medicine, University of California at Los Angeles 90024, USA.
C I Champion
M M Exner
H Erdjument-Bromage
R E Hancock
P Tempst
J N Miller
M A Lovett
University of California, Los Angeles · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Elisa de Stanchina · 1985 to 2026
$347.4M
IMMUNE MECHANISMS IN EXPERIMENTAL SYPHILISR01AI012601 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LOVETT, MICHAEL A. · 1986 to 2004
$2.3M
Immune Mechanisms in Experimental SyphilisR56AI012601 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LOVETT, MICHAEL A. · 2005 to 2005
$460k
GENETICS OF TREPONEMA PALLIDUM PATHOGENICITYR01AI021352 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LOVETT, MICHAEL A. · 1985 to 1995
–
NCI NIH HHS 5 P30 CA08748-29NIAID NIH HHS AI-12601NIAID NIH HHS AI-21352
6 · The paper itself

Abstract

We have recently reported the isolation and purification of the Treponema pallidum outer membrane and the identification of its rare protein constituents, including a 31-kDa protein markedly enriched in the outer membrane preparation (D.R. Blanco, K. Reimann, J. Skare, C.I. Champion, D. Foley, M. M. Exner, R. E. W. Hancock, J. N. Miller, and M. A. Lovett, J. Bacteriol. 176:6088-6099, 1994). In this study, we report the cloning, sequencing, and expression of the structural gene which encodes the 31-kDa outer membrane protein, designated Tromp1. The deduced amino acid sequence from the tromp1 gene sequence encodes a 318-amino-acid polypeptide with a putative 40-amino-acid signal peptide. Processing of Tromp1 results in a mature protein with a predicted molecular mass of 30,415 Da and a calculated pI of 6.6. Secondary-structure predictions identified repeated stretches of amphipathic beta-sheets typical of outer membrane protein membrane-spanning sequences. A topological model of Tromp1 containing 14 transmembrane segments is proposed. Specific antiserum against a recombinant Tromp1 fusion protein was generated and was used to identify native Tromp1 in cellular fractionation. Upon Triton X-114 extraction and phase separation of T. pallidum, the 31-kDa Tromp1 protein was detected in the detergent-phase fraction but not in the protoplasmic cylinder or aqueousphase fractions, consistent with a hydrophobic outer membrane protein. Anti-Tromp1 antiserum was also used to identify native Tromp1 purified from whole T. pallidum by Triton X-100 solubilization followed by nondenaturing isoelectric focusing. Reconstitution of purified Tromp1 into planar lipid bilayers showed porin activity based on the measured single channel conductanes of 0.15 and 0.7 nS in 1 M KCl. These findings demonstrate that Tromp1 is a transmembrane outer membrane porin protein of T. pallidum.

Indexed as

Amino Acid SequenceBacterial ProteinsBase SequenceCloning, MolecularDetergentsGenes, BacterialLipid BilayersMolecular Sequence DataOctoxynolPolyethylene GlycolsPorinsRecombinant ProteinsTreponema pallidumBacterial ProteinsDetergentsLipid BilayersNonidet P-40OctoxynolPolyethylene GlycolsPorinsRecombinant ProteinsTromp1 protein, Treponema pallidum

Identifiers

PMID7768866
PMCPMC177062
OpenAlexW2103306238

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.