Evidence map›Paper›PMID 7768429›Full record

ArticleGenetics1995

Multiple elements and auto-repression regulate Rox1, a repressor of hypoxic genes in Saccharomyces cerevisiae.

J Deckert, R Perini, B Balasubramanian, R S Zitomer

Abstract read
In one paragraph

Article in Genetics, 1995. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 99 citations in OpenAlex.

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  6. Negative feedback confers mutational robustness in yeast transcription factor regulation.Proceedings of the National Academy of Sciences of the United States of America · 2012
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

J DeckertDepartment of Biological Sciences, State University of New York at Albany 12222, USA.
R Perini
B Balasubramanian
R S Zitomer
Albany State University · US

Funding

The Hypoxic and General Stress Responses in YeastR01GM026061 · NIGMS · STATE UNIVERSITY OF NEW YORK AT ALBANY · PI ZITOMER, RICHARD S · 1985 to 2004
$1.3M
NIGMS NIH HHS GM-26061
6 · The paper itself

Abstract

The ROX1 gene encodes a heme-induced repressor of hypoxic genes in yeast. Using RNA blot analysis and a ROX1/lacZ fusion construct that included the ROX1 upstream region and only the first codon, we discovered that Rox1 represses its own expression. Gel-retardation experiments indicated that Rox1 was capable of binding to its own upstream region. Overexpression of Rox1 from the inducible GAL1 promoter was found to be inhibitory to cell growth. Also, we found that, as reported previously, Hap1 is partially responsible for heme-induction of ROX1, but, in addition, it also may play a role in ROX1 repression in the absence of heme. There is a second repressor of anaerobic ROX1 expression that requires the general repressor Tup1/Ssn6 for its function.

Indexed as

Carbon-Oxygen LyasesDNA-(Apurinic or Apyrimidinic Site) LyaseSaccharomyces cerevisiae ProteinsAerobiosisAnaerobiosisBase SequenceBinding SitesCell DivisionDNA-Binding ProteinsFungal ProteinsGene DeletionGene Expression Regulation, FungalGenes, FungalHemeMolecular Sequence DataNuclear ProteinsCarbon-Oxygen LyasesDNA-(Apurinic or Apyrimidinic Site) LyaseDNA-Binding ProteinsFungal ProteinsHemeNuclear ProteinsRepressor ProteinsROX1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTUP1 protein, S cerevisiae

Identifiers

PMID7768429
PMCPMC1206446
OpenAlexW2207025923

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.