Evidence map›Paper›PMID 7767009›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society1995

Transcripts from opposite strands of gamma satellite DNA are differentially expressed during mouse development.

F Rudert, S Bronner, J M Garnier, P Dollé

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 1995. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 103 citations in OpenAlex.

  1. Satellite DNAs in Drosophila koepferae (repleta group) reveal patterns of origin, chromosomal organization, transcription, and turnover in the buzzatii cluster.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2026
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  7. Molecular Dynamics and Evolution of Centromeres in the Genus Equus.International journal of molecular sciences · 2022
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  9. Phospho-Tau and Chromatin Landscapes in Early and Late Alzheimer's Disease.International journal of molecular sciences · 2021
    Review
  10. Centromeres Transcription and Transcripts for Better and for Worse.Progress in molecular and subcellular biology · 2021
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Roles for Non-coding RNAs in Spatial Genome Organization.Frontiers in cell and developmental biology · 2019
    Review
  17. Article
  18. Review
  19. Article
  20. SIRT6: a new guardian of mitosis.Nature structural & molecular biology · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

F RudertLaboratoire de Génétique Moléculaire des Eucaryotes du CNRS, INSERM, IGBMC, Illkirch, France.
S Bronner
J M Garnier
P Dollé
Institut de génétique et de biologie moléculaire et cellulaire · FRCentre National de la Recherche Scientifique · FRInserm · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Using in vitro immuno-selected retinoic acid response elements, we have isolated mouse genomic clones containing major (gamma) satellite DNA repeats that are considered as typical of chromosome centromeres. Several cDNA clones were then isolated from a F9 cell cDNA library and were found to harbor variants of the 234-base pair consensus gamma satellite monomer. In Northern analysis, these satellite DNA sequences hybridized predominantly to an approximately 1.8-kb RNA species in polyadenylated RNA from P19 cells. These transcripts were strongly repressed by retinoic acid, and nuclear run-on assays revealed that this repression was, at least in part, mediated at the transcriptional level. Satellite transcripts were also detected in HeLa cells, where they were similarly down-regulated by retinoids. Heterogeneously sized satellite transcripts were detected in RNA from specific mouse tissues, such as fetuses (but not placenta), adult liver, and testis. In situ hybridization analysis revealed that satellite transcripts are generated from opposite DNA strands and are differentially expressed in cells of the developing central nervous system as well as in adult liver and testis. These data may have implications on retinoic acid-mediated transcriptional regulation and centromere function.

Indexed as

Age FactorsAmino Acid SequenceAnimalsBase SequenceCentromereDNA, SatelliteEmbryonic and Fetal DevelopmentGene ExpressionGene Expression Regulation, DevelopmentalMiceMolecular Sequence DataOpen Reading FramesOrgan SpecificityRepetitive Sequences, Nucleic AcidRNA, MessengerTranscription, GeneticDNA, SatelliteRNA, MessengerTretinoin

Identifiers

PMID7767009
OpenAlexW1998673801

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.