Evidence map›Paper›PMID 7760837›Full record

ArticleMolecular and cellular biology1995

The upstream region of the FOX3 gene encoding peroxisomal 3-oxoacyl-coenzyme A thiolase in Saccharomyces cerevisiae contains ABF1- and replication protein A-binding sites that participate in its regulation by glucose repression.

A W Einerhand, W Kos, W C Smart, A J Kal, H F Tabak, T G Cooper

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In one paragraph

Article in Molecular and cellular biology, 1995. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
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  6. Article
  7. Review
  8. The Ume6 regulon coordinates metabolic and meiotic gene expression in yeast.Proceedings of the National Academy of Sciences of the United States of America · 2002
    Article
  9. Article
  10. Yeast carbon catabolite repression.Microbiology and molecular biology reviews : MMBR · 1998
    Review
  11. Article
  12. Expression of an ortholog of replication protein A1 (RPA1) is induced by gibberellin in deepwater rice.Proceedings of the National Academy of Sciences of the United States of America · 1997
    Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

A W EinerhandAcademic Medical Center, University of Amsterdam, The Netherlands.
W Kos
W C Smart
A J Kal
H F Tabak
T G Cooper
Academic Medical Center · NLUniversity of Amsterdam · NLUniversity of Tennessee Health Science Center · US

Funding

SYNTHESIS AND ASSEMBLY OF EUKARYOTIC MEMBRANESR01GM035642 · NIGMS · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI COOPER, TERRANCE G. · 1985 to 2015
$4.3M
NIGMS NIH HHS GM-35642NIGMS NIH HHS R01 GM035642
6 · The paper itself

Abstract

Expression of the FOX3 gene, which encodes yeast peroxisomal 3-oxoacyl-coenzyme A thiolase, can be induced by oleate and repressed by glucose. Previously, we have shown that induction was mediated by an oleate response element. Just upstream of this element a negatively acting control region that mediated glucose repression was found. In order to study this negative control region, we carried out DNA-binding assays and analyzed phenotypes of mutations in this region and in the trans-acting factor CAR80, which is identical to UME6. DNA-binding assays showed that two multifunctional yeast proteins, ABF1 and RP-A, interacted with the negative control element independently of the transcriptional activity of the FOX3 gene. ABF1 and RP-A, the latter being identical to BUF, were able to bind to DNA independently of one another but also simultaneously. The phenotypes of mutations in either DNA-binding sites of ABF1, RP-A, or both, which affected the DNA binding of these factors in vitro, indicated that these sites and the proteins that interact with them participate in glucose repression. The involvement of the RP-A site in glucose repression was further supported by our observation that the CAR80 gene product, which is required for repression mediated by the RP-A site, was essential for maintenance of glucose repression. In addition to the RP-A site in the FOX3 promoter, similar sequences were observed in other genes involved in peroxisomal function. RP-A proved to bind to all of these sequences, albeit with various affinities. From these results it is concluded that the ABF1 and RP-A sites are being required in concert to mediate glucose repression of the FOX3 gene. In addition, coordinated regulation of expression of genes involved in peroxisomal function in response to glucose is mediated by proteins associated with the RP-A site, probably RP-A and CAR80.

Indexed as

Saccharomyces cerevisiae ProteinsAcetyl-CoA C-AcyltransferaseBase SequenceBinding SitesDNA-Binding ProteinsGene Expression Regulation, EnzymologicGlucoseMicrobodiesMolecular Sequence DataPlasmidsReplication Protein ASaccharomyces cerevisiaeTranscription FactorsABF1 protein, S cerevisiaeAcetyl-CoA C-AcyltransferaseDNA-Binding ProteinsGlucoseReplication Protein ASaccharomyces cerevisiae ProteinsTranscription Factors

Identifiers

PMID7760837
PMCPMC230575
OpenAlexW2150938890

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.