Evidence map›Paper›PMID 7739544›Full record

ArticleMolecular and cellular biology1995

The GCR1 requirement for yeast glycolytic gene expression is suppressed by dominant mutations in the SGC1 gene, which encodes a novel basic-helix-loop-helix protein.

K Nishi, C S Park, A E Pepper, G Eichinger, M A Innis, M J Holland

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 1995. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
0.6field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 58 citations in OpenAlex.

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  5. Rational gRNA design based on transcription factor binding data.Synthetic biology (Oxford, England) · 2021
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  6. Homotypic cooperativity and collective binding are determinants of bHLH specificity and function.Proceedings of the National Academy of Sciences of the United States of America · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

K NishiDepartment of Biological Chemistry, School of Medicine, University of California, Davis 95616-8635, USA.
C S Park
A E Pepper
G Eichinger
M A Innis
M J Holland
University of California, Los Angeles · USUniversity of California, Davis · US

Funding

CONTROL OF TRANSCRIPTION OF ISOLATED EUKARYOTIC GENESR01GM030307 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI HOLLAND, MICHAEL J · 1985 to 1996
–
NIGMS NIH HHS GM30307
6 · The paper itself

Abstract

The GCR1 gene product is required for maximal transcription of yeast glycolytic genes and for growth of yeast strains in media containing glucose as a carbon source. Dominant mutations in two genes, SGC1 and SGC2, as well as recessive mutations in the SGC5 gene were identified as suppressors of the growth and transcriptional defects caused by a gcr1 null mutation. The wild-type and mutant alleles of SGC1 were cloned and sequenced. The predicted amino acid sequence of the SGC1 gene product includes a region with substantial similarity to the basic-helix-loop-helix domain of the Myc family of DNA-binding proteins. The SGC1-1 dominant mutant allele contained a substitution of glutamine for a highly conserved glutamic acid residue within the putative basic DNA binding domain. A second dominant mutant, SGC1-2, contained a valine-for-isoleucine substitution within the putative loop region. The SGC1-1 dominant mutant suppressed the GCR1 requirement for enolase, glyceraldehyde-3-phosphate dehydrogenase, phosphoglycerate kinase, phosphoglycerate mutase, and pyruvate kinase gene expression. Expression of the yeast enolase genes was reduced three- to fivefold in strains carrying an sgc1 null mutation, demonstrating that SGC1 is required for maximal enolase gene expression. Expression of the enolase genes in strains carrying gcr1 and sgc1 double null mutations was substantially less than observed for strains carrying either null mutation alone, suggesting that GCR1 and SGC1 function on parallel pathways to activate yeast glycolytic gene expression.

Indexed as

Genes, FungalSaccharomyces cerevisiae ProteinsTrans-ActivatorsAllelesAmino Acid SequenceBase SequenceDNA-Binding ProteinsDNA, FungalFungal ProteinsGene Expression Regulation, FungalGenes, DominantGlycolysisHelix-Loop-Helix MotifsMolecular Sequence DataMutationRestriction MappingDNA-Binding ProteinsDNA, FungalFungal ProteinsGCR1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTrans-ActivatorsTranscription FactorsTYE7 protein, S cerevisiae

Identifiers

PMID7739544
PMCPMC230494
OpenAlexW2107810493

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.