ArticlePlant molecular biology1995
Barley microsatellites: allele variation and mapping.
Article in Plant molecular biology, 1995. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.
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Who cites it
56 citing papers in PubMed.
- Deciphering the genetic diversity and population structure of wild barley germplasm against corn leaf aphid, Rhopalosiphum maidis (Fitch).Scientific reports · 2023Article
- Exploring WildPlants (Basel, Switzerland) · 2023Article
- In Silico Screening and Development of Microsatellite Markers for Genetic Analysis inAnimals : an open access journal from MDPI · 2022Article
- Genetic diversity, population structure and relationship of Ethiopian barley (Journal of genetics · 2022Article
- Development of genome-wide InDel markers and their integration with SSR, DArT and SNP markers in single barley map.BMC genomics · 2015Article
- Genetic diversity and population structure among pea (Pisum sativum L.) cultivars as revealed by simple sequence repeat and novel genic markers.Molecular biotechnology · 2014Article
- Genetic and molecular bases of yield-associated traits: a translational biology approach between rice and wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2014Review
- Genetic analyses of BaMMV/BaYMV resistance in barley accession HOR4224 result in the identification of an allele of the translation initiation factor 4e (Hv-eIF4E) exclusively effective against Barley mild mosaic virus (BaMMV).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2014Article
- Development and molecular characterization of genic molecular markers for grain protein and calcium content in finger millet (Eleusine coracana (L.) Gaertn.).Molecular biology reports · 2014Article
- Development of 5123 intron-length polymorphic markers for large-scale genotyping applications in foxtail millet.DNA research : an international journal for rapid publication of reports on genes and genomes · 2014Article
- Development of universal genetic markers based on single-copy orthologous (COSII) genes in Poaceae.Plant cell reports · 2013Article
- Population structure of barley landrace populations and gene-flow with modern varieties.PloS one · 2013Article
- Development of SSR and gene-targeted markers for construction of a framework linkage map of Catharanthus roseus.Annals of botany · 2011Article
- Genetic differentiation and geographical Relationship of Asian barley landraces using SSRs.Genetics and molecular biology · 2011Article
- Chromosomal loci associated with endosperm hardness in a malting barley cross.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2011Article
- Diversity in Indian barley (Hordeum vulgare) cultivars and identification of genotype-specific fingerprints using microsatellite markers.Journal of genetics · 2010Article
- Efficiency of RAPD, SSR and cytochrome P450 gene based markers in accessing genetic variability amongst finger millet (Eleusine coracana) accessions.Molecular biology reports · 2010Article
- Assessment of genetic diversity by simple sequence repeat markers among forty elite varieties in the germplasm for malting barley breeding.Journal of Zhejiang University. Science. B · 2010Article
- Comparative evaluation of genetic diversity using RAPD, SSR and cytochrome P450 gene based markers with respect to calcium content in finger millet (Eleusine coracana L. Gaertn.).Journal of genetics · 2010Article
- Identification and mapping of the leaf stripe resistance gene Rdg1a in Hordeum spontaneum.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2010Article
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2 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Microsatellites have developed into a powerful tool for mapping mammalian genomes and first reports about their use in plants have been published. A database search of 228 barley sequences from GenBank and EMBL was made to determine which simple sequence repeat (SSR) motif prevails in barley. Nearly all types of SSRs were found. The (A)n and (T)n SSRs occurred more often than (C)n and (G)n for n > or = 10. Among the dinucleotide repeats, the (CG)n SSRs occurred least often. Trinucleotide repeats did not occur with n > 7 and there is no correlation between the GC content in the trinucleotide motifs and the number of observed SSRs. Analysing 15 different microsatellites with 11 barleys yielded 2.1 alleles per microsatellite. Sequencing 25 putative microsatellites showed that the resolution capacity of high-quality agarose gels was sufficient to determine differences of only three base pairs. Five microsatellites were mapped on three different chromosomes of a barley RFLP map.
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