Evidence map›Paper›PMID 7630720›Full record

ArticleNucleic acids research1995

Accurate and efficient N-6-adenosine methylation in spliceosomal U6 small nuclear RNA by HeLa cell extract in vitro.

S Shimba, J A Bokar, F Rottman, R Reddy

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Nucleic acids research, 1995. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
0.3field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 68 citations in OpenAlex.

  1. The role of NTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
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  9. Analogs ofMolecular biology · 2022
    Article
  10. Review
  11. Review
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  13. A single mNature communications · 2021
    Article
  14. Spliceosomal snRNA Epitranscriptomics.Frontiers in genetics · 2021
    Review
  15. Article
  16. Epitranscriptomics in the Heart: a Focus on mCurrent heart failure reports · 2020
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  17. Review
  18. Insight into mOpen biology · 2020
    Review
  19. Interaction between NMolecular cancer · 2020
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  20. The roles of m6A RNA modifiers in human cancer.Journal of the Chinese Medical Association : JCMA · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

S ShimbaDepartment of Pharmacology, Baylor College of Medicine, Houston, TX 77030, USA.
J A Bokar
F Rottman
R Reddy
Baylor College of Medicine · USCase Western Reserve University · US

Funding

NCI NIH HHS CA-38310NIGMS NIH HHS GM-38320
6 · The paper itself

Abstract

Human U6 small nuclear RNA (U6 snRNA), an abundant snRNA required for splicing of pre-mRNAs, contains several post-transcriptional modifications including a single m6A (N-6-methyladenosine) at position 43. This A-43 residue is critical for the function of U6 snRNA in splicing of pre-mRNAs. Yeast and plant U6 snRNAs also contain m6A in the corresponding position showing that this modification is evolutionarily conserved. In this study, we show that upon incubation of an unmodified U6 RNA with HeLa cell extract, A-43 residue in human U6 snRNA was rapidly converted to m6A-43. This conversion was detectable as early as 3 min after incubation and was nearly complete in 60 min; no other A residue in U6 snRNA was converted to m6A. Deletion studies showed that the stem-loop structure near the 5' end of U6 snRNA is dispensable for m6A formation; however, the integrity of the 3' stem-loop was necessary for efficient m6A formation. These data show that a short stretch of primary sequence flanking the methylation site is not sufficient for U6 m6A methyltransferase recognition and the enzyme probably recognizes secondary and/or tertiary structural features in U6 snRNA. The enzyme that catalyzes m6A formation in U6 snRNA appears to be distinct from the prolactin mRNA methyltransferase which is also present in HeLa nuclear extracts.

Indexed as

AdenosineBase SequenceCell NucleusHeLa CellsHumansKineticsMethylationMethyltransferasesMolecular Sequence DataNucleic Acid ConformationProlactinRNA, MessengerRNA, Small NuclearSpliceosomesSubstrate SpecificityAdenosineMethyltransferasesProlactinRNA, MessengerRNA, Small Nuclear

Identifiers

PMID7630720
PMCPMC307046
OpenAlexW1995128009

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.