Evidence map›Paper›PMID 7609037›Full record

ArticleJournal of virology1995

Stimulation of basal transcription from the mouse mammary tumor virus promoter by Oct proteins.

M H Kim, D O Peterson

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 1995. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Octamer-binding transcription factors: genomics and functions.Frontiers in bioscience (Landmark edition) · 2013
    Review
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

M H KimDepartment of Biochemistry and Biophysics, Texas A&M University, College Station 77843-2128, USA.
D O Peterson
Texas A&M University · US

Funding

GENETIC AND MOLECULAR ANALYSIS OF STEROID RESPONSIVENESSR01CA032695 · NCI · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI PETERSON, DAVID O · 1986 to 1995
–
MECHANISMS OF STEROID HORMONE-REGULATED TRANSCRIPTIONR01CA048041 · NCI · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI PETERSON, DAVID O · 1988 to 1992
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NCI NIH HHS CA32695NCI NIH HHS CA48041
6 · The paper itself

Abstract

The steroid hormone-inducible promoter of mouse mammary tumor virus (MMTV) contains three overlapping sequences related to the consensus octamer motif ATGCAAAT. Basal promoter activity in the absence of hormone induction from a template in which all three octamer elements were mutated was decreased by two-to threefold in in vitro transcription assays. Oct-1 protein purified from HeLa cell nuclear extracts, as well as recombinant Oct-1 expressed in bacteria, recognized MMTV octamer-related sequences, as shown by DNase I footprinting. Furthermore, rabbit polyclonal antiserum directed against recombinant Oct-1 completely inhibited the formation of specific complexes between MMTV octamer-related sequences and proteins present in nuclear extracts of HeLa cells, indicating that Oct-1 is the major protein in HeLa nuclear extracts that recognizes octamer-related sequences in the MMTV promoter. In addition, depletion of Oct-1 from the nuclear extract by using Oct-1-specific antiserum or a sequence-specific DNA affinity resin decreased in vitro transcription from the wild-type MMTV promoter to a level identical to that obtained from a promoter in which all three octamer-related sequences were mutated. Addition of purified HeLa Oct-1 or recombinant Oct-1 to the depleted extract selectively increased transcription from the wild-type relative to the mutated promoter, demonstrating that Oct-1 transcription factor stimulates basal transcription from the MMTV promoter. A similar effect was observed when purified recombinant Oct-2 was added to the Oct-1-depleted extract, suggesting that Oct-2 may play an important role in MMTV transcription in B cells.

Indexed as

Promoter Regions, GeneticBase SequenceChromatography, AffinityDNA-Binding ProteinsDNA, ViralHeLa CellsHost Cell Factor C1HumansImmune SeraMammary Tumor Virus, MouseMolecular Sequence DataMutationNuclear ProteinsOctamer Transcription Factor-1Octamer Transcription Factor-2Recombinant ProteinsDNA-Binding ProteinsDNA, ViralHCFC1 protein, humanHost Cell Factor C1Immune SeraNuclear ProteinsOctamer Transcription Factor-1Octamer Transcription Factor-2POU2F1 protein, humanPOU2F2 protein, humanPou2f2 protein, mouseRecombinant ProteinsTranscription Factors

Identifiers

PMID7609037
PMCPMC189278
OpenAlexW2167760451

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.