Evidence map›Paper›PMID 7565720›Full record

ArticleMolecular and cellular biology1995

The intergenic region between the divergently transcribed niiA and niaD genes of Aspergillus nidulans contains multiple NirA binding sites which act bidirectionally.

P J Punt, J Strauss, R Smit, J R Kinghorn, C A van den Hondel, C Scazzocchio

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In one paragraph

Article in Molecular and cellular biology, 1995. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 132 citations in OpenAlex.

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  10. Nitrate Assimilation inFrontiers in microbiology · 2017
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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

P J PuntDepartment of Molecular Genetics and Gene Technology, TNO Nutrition and Food Research Institute, Rijswijk, The Netherlands.
J Strauss
R Smit
J R Kinghorn
C A van den Hondel
C Scazzocchio
Food & Nutrition · NLUniversité Paris-Sud · FRLaboratory of Molecular Genetics · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The niaD and niiA genes of Aspergillus nidulans, which code, respectively, for nitrate and nitrite reductases, are divergently transcribed, and their ATGs are separated by 1,200 bp. The genes are under the control of the positively acting NirA transcription factor, which mediates nitrate induction. The DNA binding domain of NirA was expressed as a fusion protein with the glutathione S-transferase of Schistosoma japonicum. Gel shift and footprint experiments have shown that in the intergenic region there are four binding sites for the NirA transcription factor. These sites can be represented by the nonpalindromic consensus 5'CTCCGHGG3'. Making use of a bidirectional expression vector, we have analyzed the role of each of the sites in niaD and niiA expression. The sites were numbered from the niiA side. It appeared that site 1 is necessary for the inducibility of niiA only, while sites 2, 3, and to a lesser extent 4 (which is nearer to and strongly affects niaD) act bidirectionally. The results also suggest that of the 10 binding sites for the AreA protein, which mediates nitrogen metabolite repression, those which are centrally located are physiologically important. The insertion of an unrelated upstream activating sequence into the intergenic region strongly affected the expression of both genes, irrespective of the orientation in which the element was inserted.

Indexed as

Aspergillus nidulansBase SequenceDNA, FungalFungal ProteinsGene Expression Regulation, FungalGenes, FungalMolecular Sequence DataMultigene FamilyNitrate ReductaseNitrate ReductasesNitrite ReductasesPoint MutationRecombinant Fusion ProteinsRegulatory Sequences, Nucleic AcidSequence Analysis, DNASequence DeletionAreA protein, Aspergillus nidulansDNA, FungalFungal ProteinsNirA protein, Aspergillus nidulansNitrate ReductaseNitrate ReductasesNitrite ReductasesRecombinant Fusion ProteinsTranscription Factors

Identifiers

PMID7565720
PMCPMC230819
OpenAlexW1890698840

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.