Evidence map›Paper›PMID 7503691›Full record

ArticleArchives of virology1995

BK virus and a new type of JC virus excreted by HIV-1 positive patients in rural Tanzania.

H T Agostini, G R Brubaker, J Shao, A Levin, C F Ryschkewitsch, W A Blattner, G L Stoner

Abstract read
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Article in Archives of virology, 1995. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 74 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Review
  5. Review
  6. Evolution of BK virus based on complete genome data.Journal of molecular evolution · 2006
    Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Typing of urinary JC virus DNA offers a novel means of tracing human migrations.Proceedings of the National Academy of Sciences of the United States of America · 1997
    Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

H T AgostiniLaboratory of Experimental Neuropathology, National Institute of Neurological Disorders and Stroke, NIH, Bethesda, Maryland, USA.
G R Brubaker
J Shao
A Levin
C F Ryschkewitsch
W A Blattner
G L Stoner
National Institute of Neurological Disorders and Stroke · USMuhimbili University of Health and Allied Sciences · TZNational Cancer Institute · USSt Bartholomew's Hospital · GB

Funding

INTERNATIONAL EPIDEMIOLOGY SURVEY OF HUMAN RETROVIRUSESN01CP033005 · CP · RESEARCH TRIANGLE INSTITUTE · PI KRUGER, HILLARY R · 1993 to 1998
–
NCI NIH HHS N01-CP-33005
6 · The paper itself

Abstract

HIV-1 positive patients from Tanzanian villages near Shirati were examined for urinary excretion of the human polyomaviruses JC and BK using the polymerase chain reaction (PCR). BK virus (BKV) was detected in 11 of 23 individuals tested. The BKV DNA sequences were all closely related to prototype Gardner strain and BKV (DUN). In contrast, a new type of JCV, termed Type 3 [or JCV (Shi)], was identified in seven of these same 23 individuals by comparison with Type 1 and Type 2 sequences of the VP1/intergenic/T antigen region of U.S., European and Asian strains. This suggests that JCV and BKV, although closely related, have different evolutionary histories within the African population. The six BKV regulatory regions amplified all showed the archetypal configuration. However, two of the seven JCV regulatory regions showed rearrangements: a small deletion and an inverted repeat. JCV causes a fatal demyelinating disease, progressive multifocal leukoencephalopathy (PML), in about 5% of AIDS patients in Europe and the U.S.A., but only one case has been reported in Africa. Our results suggest that this rarity of PML is not due to the absence of JCV in the African population.

Indexed as

AdolescentAdultAmino Acid SequenceBase SequenceBK VirusCapsidDNA PrimersDNA, ViralFemaleHIV InfectionsHumansJC VirusMaleMiddle AgedMolecular Sequence DataPapillomavirus InfectionsDNA PrimersDNA, ViralAfricaAfrica South Of The SaharaBiologyDemographic FactorsDeveloping CountriesDiseasesEastern AfricaEnglish Speaking AfricaExaminations And DiagnosesGeneticsHiv InfectionsLaboratory Examinations And DiagnosesLaboratory ProceduresNeurologic EffectsPhysiologyPopulationPopulation CharacteristicsResearch ReportRural PopulationSigns And SymptomsTanzaniaViral Diseases

Identifiers

PMID7503691
OpenAlexW1987980595

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.