Evidence map›Paper›PMID 7501452›Full record

ArticleNucleic acids research1995

Promoter elements of the PHR1 gene of Saccharomyces cerevisiae and their roles in the response to DNA damage.

G B Sancar, R Ferris, F W Smith, B Vandeberg

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 1995. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. RPH1 and GIS1 are damage-responsive repressors of PHR1.Molecular and cellular biology · 1999
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

G B SancarDepartment of Biochemistry and Biophysics, School of Medicine, University of North Carolina at Chapel Hill 27599-7260, USA.
R Ferris
F W Smith
B Vandeberg
University of North Carolina at Chapel Hill · US

Funding

FUNCTION OF THE S CEREVISIAE PHRI GENE AND PHOTOLYASER01GM035123 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI SANCAR, GWENDOLYN B · 1985 to 2004
$1.4M
NIGMS NIH HHS GM35123
6 · The paper itself

Abstract

The PHR1 gene of Saccharomyces cerevisiae encodes the apoenzyme for the DNA repair enzyme photolyase. PHR1 transcription is induced in response to 254 nm radiation and a variety of chemical damaging agents. We report here the identification of promoter elements required for PHR1 expression. Transcription is regulated primarily through three sequence elements clustered within a 120 bp region immediately upstream of the translational start site. A 20 bp interrupted palindrome comprises UASPHR1 and is responsible for 80-90% of basal and induced expression. UASPHR1 alone can activate transcription of a CYC1 minimal promoter but does not confer damage responsiveness. In the intact PHR1 promoter UAS function is dependent upon an upstream essential sequence (UES). URSPHR1 contains a binding site for the damage-responsive repressor Prp; consistent with this role, deletion or specific mutations of the URS increase basal level expression and decrease the induction ratio. Deletion of URSPHR1 also eliminates the requirement for UESPHR1 for promoter activation, indicating that the UES attenuates Prp-mediated repression. Sequences within UASPHR1 are similar to regulatory sequences found upstream of both damage responsive and nonresponsive genes involved in DNA repair and metabolism.

Indexed as

Cytochromes cDNA DamageFungal ProteinsGene Expression Regulation, FungalGenes, FungalMembrane GlycoproteinsPromoter Regions, GeneticSaccharomyces cerevisiae ProteinsApoenzymesBase Sequencebeta-GalactosidaseCytochrome c GroupDeoxyribodipyrimidine Photo-LyaseDNA Mutational AnalysisDNA RepairMolecular Sequence DataApoenzymesbeta-GalactosidaseCYC1 protein, S cerevisiaeCytochrome c GroupCytochromes cDeoxyribodipyrimidine Photo-LyaseFungal ProteinsMembrane GlycoproteinsPHR1 protein, Candida albicansRepressor ProteinsSaccharomyces cerevisiae Proteins

Identifiers

PMID7501452
PMCPMC307386
OpenAlexW2060941574

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.