Evidence map›Paper›PMID 7498733›Full record

ArticleGenetics1995

The ornithine decarboxylase gene of Caenorhabditis elegans: cloning, mapping and mutagenesis.

M Macrae, R H Plasterk, P Coffino

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 1995. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
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  4. Caenorhabditis elegans P5B-type ATPase CATP-5 operates in polyamine transport and is crucial for norspermidine-mediated suppression of RNA interference.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2010
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

M MacraeDepartment of Microbiology and Immunology, University of California, San Francisco 94143, USA.
R H Plasterk
P Coffino
University of California, San Francisco · US

Funding

Ubiquitin-Independent Proteasome DegradationR01GM045335 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI COFFINO, PHILIP · 1991 to 2012
$4.5M
MECHANISMS OF ORNITHINE DECARBOXYLASE REGULATIONR01CA029048 · NCI · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI COFFINO, PHILIP · 1985 to 1994
–
NCI NIH HHS R01 CA-29048NIGMS NIH HHS R01 GM-45335
6 · The paper itself

Abstract

The gene (odc-1) encoding ornithine decarboxylase, a key enzyme in polyamine biosynthesis, was cloned and characterized. Two introns interrupt the coding sequence of the gene. The deduced protein contains 422 amino acids and is homologous to ornithine decarboxylases of other eukaryotic species. In vitro translation of a transcript of the cDNA yielded an enzymatically active product. The mRNA is 1.5 kb in size and is formed by trans-splicing to SL1, a common 5' RNA segment. odc-1 maps to the middle of LG V, between dpy-11 and unc-42 and near a breakpoint of the nDf32 deficiency strain. Enzymatic activity is low in starved stage 1 (L1) larva and, after feeding, rises progressively as the worms develop. Targeted gene disruption was used to create a null allele. Homozygous mutants are normally viable and show no apparent defects, with the exception of a somewhat reduced brood size. In vitro assays for ornithine decarboxylase activity, however, show no detectable enzymatic activity, suggesting that ornithine decarboxylase is dispensible for nematode growth in the laboratory.

Indexed as

Amino Acid SequenceAnimalsBase SequenceBlotting, NorthernBlotting, SouthernCaenorhabditis elegansMolecular Sequence DataMutagenesis, InsertionalOrnithine DecarboxylasePolymerase Chain ReactionRestriction MappingRNA, MessengerRNA SplicingTranscription, GeneticOrnithine DecarboxylaseRNA, Messenger

Identifiers

PMID7498733
PMCPMC1206631
OpenAlexW2118336736

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.